RNA–Protein interactions for RNA: ENST00000238856.8

AFTPH-202, Transcript of aftiphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFTPH, Length 4,040 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-202ENST00000238856 TOPAZ1Q8N9V7 1692 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 TDP2O95551 362 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 LIG3P49916 1009 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 TBC1D5Q92609 795 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 MYO1CO00159 1063 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 PLEKP08567 350 aaPredicted RBP18.27■□□□□ 0.52
AFTPH-202ENST00000238856 KRT13P13646 458 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 PRR16Q569H4 304 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 NAA35Q5VZE5 725 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 IFT20Q8IY31 132 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 KRT12Q99456 494 aa18.27■□□□□ 0.52
AFTPH-202ENST00000238856 GGCXP38435 758 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 ADAM9Q13443 819 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 OTUD6BQ8N6M0 293 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 KIFC2Q96AC6 838 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 USP40Q9NVE5 1235 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 ZBTB21Q9ULJ3 1066 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 LRRC53A6NM62 1247 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 TNNC1P63316 161 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.51
AFTPH-202ENST00000238856 GFPT1Q06210 699 aaPredicted RBP18.27■□□□□ 0.51
AFTPH-202ENST00000238856 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.51
AFTPH-202ENST00000238856 CDKAL1Q5VV42 579 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 EPB41L5Q9HCM4 733 aa18.27■□□□□ 0.51
AFTPH-202ENST00000238856 ORC4O43929 436 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 TCP1P17987 556 aaKnown RBP18.26■□□□□ 0.51
AFTPH-202ENST00000238856 ABCB4P21439 1286 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
AFTPH-202ENST00000238856 MAN2A1Q16706 1144 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 TMEM139Q8IV31 216 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 DDX12PQ92771 950 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 TRIM9Q9C026 710 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 LACRTQ9GZZ8 138 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 PACSIN2Q9UNF0 486 aaPredicted RBP18.26■□□□□ 0.51
AFTPH-202ENST00000238856 SNAP25P60880 206 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 FAM13AO94988 1023 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 VWA3BQ502W6 1294 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 MARCH10Q8NA82 808 aaPredicted RBP18.26■□□□□ 0.51
AFTPH-202ENST00000238856 BARHL2Q9NY43 387 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 EHD2Q9NZN4 543 aa18.26■□□□□ 0.51
AFTPH-202ENST00000238856 GOLGA6L7A0A1B0GV03 622 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 RNF225M0QZC1 329 aaPredicted RBP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 GCNT3O95395 438 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 RSRC2Q7L4I2 434 aaKnown RBP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 GPATCH11Q8N954 259 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 AK8Q96MA6 479 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 USP14P54578 494 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 BEND6Q5SZJ8 279 aaPredicted RBP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 ANKZF1Q9H8Y5 726 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 CAPN11Q9UMQ6 739 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 JRKLQ9Y4A0 524 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 ZRANB2O95218 330 aaKnown RBP eCLIP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 DYDC1Q8WWB3 177 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
AFTPH-202ENST00000238856 CAPS2Q9BXY5 557 aa18.25■□□□□ 0.51
AFTPH-202ENST00000238856 PPFIA1Q13136 1202 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 RETREG2Q8NC44 543 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 LMTK3Q96Q04 1460 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 HEXIM1O94992 359 aaKnown RBP18.24■□□□□ 0.51
AFTPH-202ENST00000238856 IFI16Q16666 785 aaKnown RBP18.24■□□□□ 0.51
AFTPH-202ENST00000238856 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 FAM196AQ6ZSG2 479 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 PPANQ9NQ55 473 aaKnown RBP18.24■□□□□ 0.51
AFTPH-202ENST00000238856 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 LAD1O00515 517 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 GTF2A1P52655 376 aaPredicted RBP18.24■□□□□ 0.51
AFTPH-202ENST00000238856 GRM4Q14833 912 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 CEP85LQ5SZL2 805 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 PDXDC2PQ6P474 469 aa18.24■□□□□ 0.51
AFTPH-202ENST00000238856 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
AFTPH-202ENST00000238856 MED15Q96RN5 788 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 CUEDC2Q9H467 287 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
AFTPH-202ENST00000238856 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 LLGL1Q15334 1064 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 ARHGAP44Q17R89 818 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 CACNB3P54284 484 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 PAK2Q13177 524 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 NFIXQ14938 502 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
AFTPH-202ENST00000238856 LRRC1Q9BTT6 524 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 DNM3Q9UQ16 869 aa18.23■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L15C9J2P7 530 aa18.22■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L13C9JLJ4 530 aa18.22■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L11C9JVI0 530 aa18.22■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L18D6R9N7 530 aa18.22■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L22D6RA61 530 aa18.22■□□□□ 0.51
AFTPH-202ENST00000238856 USP17L17D6RBQ6 530 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms