RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 PLCD3Q8N3E9 789 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 TTLL6Q8N841 843 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.36■■□□□ 1.65
TARBP1-201ENST00000040877 ACCSQ96QU6 501 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 PIH1D3Q9NQM4 214 aaKnown RBP25.36■■□□□ 1.65
TARBP1-201ENST00000040877 DALRD3Q5D0E6 543 aaKnown RBP25.36■■□□□ 1.65
TARBP1-201ENST00000040877 GPT2Q8TD30 523 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 P2RX5Q93086 422 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 LMNB1P20700 586 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 NSFP46459 744 aaKnown RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 TRIM50Q86XT4 487 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 ZBTB9Q96C00 473 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 SRP68Q9UHB9 627 aaKnown RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 KCNK3O14649 394 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 CCND2P30279 289 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 MYL7Q01449 175 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 NECTIN1Q15223 517 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 STMN2Q93045 179 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 TRIM11Q96F44 468 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 FAM193BQ96PV7 902 aaPredicted RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 DDX41Q9UJV9 622 aaKnown RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 EPN1Q9Y6I3 576 aaPredicted RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 I3L4J1 428 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 GBP1P32455 592 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 SEPT9Q9UHD8 586 aaPredicted RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 MYO3BQ8WXR4 1341 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 FKBP3Q00688 224 aaKnown RBP25.35■■□□□ 1.65
TARBP1-201ENST00000040877 SH3GLB2Q9NR46 395 aa25.35■■□□□ 1.65
TARBP1-201ENST00000040877 KRIT1O00522 736 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 GDF11O95390 407 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 NR2F2P24468 414 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 C17orf53Q8N3J3 647 aaPredicted RBP25.34■■□□□ 1.65
TARBP1-201ENST00000040877 RNF8O76064 485 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 GABPAQ06546 454 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 ZNF658Q5TYW1 1059 aaPredicted RBP25.34■■□□□ 1.65
TARBP1-201ENST00000040877 LRRC8AQ8IWT6 810 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 SIRT2Q8IXJ6 389 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 BBOF1Q8ND07 529 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 SLC12A2P55011 1212 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 PSMD2Q13200 908 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 ARL6IP4Q66PJ3 421 aaKnown RBP25.34■■□□□ 1.65
TARBP1-201ENST00000040877 MTA3Q9BTC8 594 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
TARBP1-201ENST00000040877 RFX7Q2KHR2 1363 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 USP17L8P0C7I0 530 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 PHBP35232 272 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 GPIHBP1Q8IV16 184 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 RUNDC3BQ96NL0 473 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 STRBPQ96SI9 672 aaKnown RBP25.34■■□□□ 1.65
TARBP1-201ENST00000040877 OVOS2A0A0G2JMS6 1433 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 OVOS2A0A0J9YW53 1432 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 OVOS2Q6IE36 1432 aa25.34■■□□□ 1.65
TARBP1-201ENST00000040877 SH3BP5O60239 455 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 CNGA1P29973 690 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 TMEM179Q6ZVK1 233 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 MRRFQ96E11 262 aaKnown RBP25.33■■□□□ 1.65
TARBP1-201ENST00000040877 PNMA6FA0A0J9YX94 578 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 TLR3O15455 904 aaKnown RBP25.33■■□□□ 1.65
TARBP1-201ENST00000040877 KRT71Q3SY84 523 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 TNS3Q68CZ2 1445 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 PIK3CAP42336 1068 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 RNF169Q8NCN4 708 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 VPS37BQ9H9H4 285 aa25.33■■□□□ 1.65
TARBP1-201ENST00000040877 TYW1Q9NV66 732 aaKnown RBP25.33■■□□□ 1.65
TARBP1-201ENST00000040877 CDK8P49336 464 aa25.33■■□□□ 1.64
TARBP1-201ENST00000040877 MAN2A1Q16706 1144 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 SRPRBQ9Y5M8 271 aaKnown RBP25.32■■□□□ 1.64
TARBP1-201ENST00000040877 PPFIA4O75335 1185 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 MMP10P09238 476 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 AP5M1Q9H0R1 490 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 IFT122Q9HBG6 1241 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 ANKFY1Q9P2R3 1169 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
TARBP1-201ENST00000040877 TBC1D8O95759 1140 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 ALCAMQ13740 583 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
TARBP1-201ENST00000040877 RAD17O75943 681 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 IRX5P78411 483 aaPredicted RBP25.31■■□□□ 1.64
TARBP1-201ENST00000040877 RASGRP4Q8TDF6 673 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 GSDMBQ8TAX9 411 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 STAG1Q8WVM7 1258 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 RPS6KC1Q96S38 1066 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 AFPP02771 609 aaKnown RBP25.31■■□□□ 1.64
TARBP1-201ENST00000040877 MAP7D3Q8IWC1 876 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 FAM186BQ8IYM0 893 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 ARHGAP24Q8N264 748 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 NBPF3Q9H094 633 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 KMT5AQ9NQR1 393 aa25.31■■□□□ 1.64
TARBP1-201ENST00000040877 ASNSP08243 561 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 SLC16A2P36021 539 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 DESI2Q9BSY9 194 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 WDR19Q8NEZ3 1342 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 RCAN1P53805 252 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 FAM182BQ5T319 152 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 TSC1Q92574 1164 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 IFNB1P01574 187 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 MCAMP43121 646 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 CLTCL1P53675 1640 aa25.3■■□□□ 1.64
TARBP1-201ENST00000040877 TPD52P55327 224 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms