RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Sept9Q80UG5 583 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Klhl42Q8BFQ9 493 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Miga2Q8BK03 593 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Caps2Q8BUG5 550 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ubac1Q8VDI7 409 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pagr1aQ99L02 253 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Apopt1Q9CQW7 192 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Q9D1Z2 194 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fsip1Q9D3V5 435 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fam84aQ9D650 292 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 CenphQ9QYM8 241 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fxr2Q9WVR4 673 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccdc88aQ5SNZ0 1873 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Zfp646Q6NV66 1788 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 A0A0U1RNP2 1173 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Zscan18E9PUD6 809 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cyp2c23E9Q5K4 494 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 SarsP26638 512 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Atp1b3P97370 278 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gtf2f1Q3THK3 508 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pacs2Q3V3Q7 862 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Dpf2Q61103 391 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cnga2Q62398 664 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fkbp3Q62446 224 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Adam6bQ6IMH7 756 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 RragbQ6NTA4 374 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 NelfbQ8C4Y3 580 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ano2Q8CFW1 1002 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ltbp1Q8CG19 1712 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tbc1d23Q8K0F1 684 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Matr3Q8K310 846 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ssh3Q8K330 649 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tmem134Q8R0J4 195 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Eif3cQ8R1B4 911 aaKnown RBP6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Vps18Q8R307 973 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Rnf112Q96DY5 654 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Lztr1Q9CQ33 837 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 AasdhpptQ9CQF6 309 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Bcl2l12Q9D3J3 255 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tfcp2Q9ERA0 502 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Magi2Q9WVQ1 1275 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Trip6Q9Z1Y4 480 aa6.94□□□□□ -1.3
Lig4-202ENSMUST00000170033 Scn9aQ62205 1984 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Map7d1A2AJI0 846 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Zfp275G3X904 499 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Hnrnph1O35737 449 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ftl1P29391 183 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cdc25aP48964 514 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Btg3P50615 252 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mybl1P51960 751 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Hnrnph2P70333 449 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Papd7Q6PB75 542 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Kdm1aQ6ZQ88 853 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Strip1Q8C079 837 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Spata4Q8K3V1 295 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 HyiQ8R1F5 277 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Znf445Q8R2V3 986 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Usp33Q8R5K2 909 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 TxlnbQ8VBT1 685 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Prc1Q99K43 603 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 RarsQ9D0I9 660 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mad2l2Q9D752 211 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sgpp1Q9JI99 430 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Sh2b2Q9JID9 621 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tacc2Q9JJG0 1149 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mtmr9Q9Z2D0 545 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Arhgap6O54834 987 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Bnip3O55003 187 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nub1P54729 614 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 IntuQ059U7 942 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Znf652Q5DU09 608 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Best3Q6H1V1 669 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pabpc4Q6PHQ9 660 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ttc7aQ8BGB2 858 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Fbxl5Q8C2S5 690 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Vps52Q8C754 723 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tmem63cQ8CBX0 802 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Q8CEZ4 452 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ddx54Q8K4L0 874 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ccdc12Q8R344 166 aaKnown RBP6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Ifih1Q8R5F7 1025 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Krt79Q8VED5 531 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Vps16Q920Q4 839 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 1700018B08RikQ9DA83 213 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pik3ap1Q9EQ32 811 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Hip1rQ9JKY5 1068 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Morc1Q9WVL5 950 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gm5114W4VSN8 858 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Cacna1fQ9JIS7 1985 aa6.93□□□□□ -1.3
Lig4-202ENSMUST00000170033 Scgb2b11A0A087WR49 112 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Rexo5D3YW29 759 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Diaph1O08808 1255 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Snx12O70493 165 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Dynll1P63168 89 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Grm4Q68EF4 912 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Drc7Q6V3W6 876 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Rps6ka6Q7TPS0 764 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Srrm3Q80WV7 648 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Kif2bQ8C0N1 668 aa6.92□□□□□ -1.3
Lig4-202ENSMUST00000170033 Krt222Q8CCX5 294 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms