RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Gm43738A0A0G2JEA5 862 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cyp3a59D3Z2W7 503 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Slc4a1P04919 929 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 P4hbP09103 509 aaKnown RBP8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Lrch1P62046 709 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Plekhf1Q3TB82 279 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tmem35bQ3U0Y2 150 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Luc7l3Q5SUF2 432 aaKnown RBP8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Arl13bQ640N2 427 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rassf9Q8K342 435 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Wasf1Q8R5H6 559 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 HgsQ99LI8 775 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Spc24Q9D083 201 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mphosph6Q9D1Q1 161 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ubxn8Q9QZ49 277 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 XlrP05531 208 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Usp4P35123 962 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ap1m1P35585 423 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tlr11Q6R5P0 926 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Chmp2bQ8BJF9 213 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 VillQ91YD6 859 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Apobec3Q99J72 440 aaKnown RBP8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Noa1Q9JJG9 693 aaKnown RBP8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rnf4Q9QZS2 194 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Camta1A2A891 1682 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Fam171a1A2ATK9 892 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ptpn20O55082 426 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Slc4a4O88343 1079 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 ProcP33587 460 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Alox15P39654 663 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 PltpP55065 493 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Zfp781Q0P5U5 243 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ccdc110Q3V125 848 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mapk6Q61532 720 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Anks6Q6GQX6 883 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mpp4Q6P7F1 635 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Hirip3Q8BLH7 601 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Sirt2Q8VDQ8 389 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Golph3Q9CRA5 298 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mrps9Q9D7N3 390 aaKnown RBP8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cyth1Q9QX11 398 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Krt71Q9R0H5 524 aa8.36□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nwd2Q6P5U7 1742 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ddx23D3Z0M9 819 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nedd9O35177 833 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ctnnal1O88327 731 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Cyp2d9P11714 504 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Zfp42P22227 288 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mex3cQ05A36 652 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ckap2Q3V1H1 664 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gnat3Q3V3I2 354 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 HnrnpdQ60668 355 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Slc27a1Q60714 646 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Utp14bQ6EJB6 756 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Bank1Q80VH0 783 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 RragaQ80X95 313 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Haus1Q8BHX1 278 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Lin7aQ8JZS0 233 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tmem119Q8R138 280 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rnf34Q99KR6 376 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Zcchc8Q9CYA6 709 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rrp15Q9CYX7 281 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Toe1Q9D2E2 511 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Rexo2Q9D8S4 237 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Stk39Q9Z1W9 556 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Olfr310B2RVZ1 332 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Fam186bD3Z420 943 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ect2Q07139 913 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Txndc2Q6P902 515 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Shtn1Q8K2Q9 631 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Exoc1Q8R3S6 894 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mtfr1lQ9CWE0 289 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Sept12Q9D451 317 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Appbp2Q9DAX9 585 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nphs1Q9QZS7 1256 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Taf7Q9R1C0 341 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Myh2G3UW82 1942 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tbc1d8bA3KGB4 1114 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 R3hdm1E9Q9Q2 1135 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gucy1b3O54865 620 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 AfpP02772 605 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Ccng1P51945 294 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Eef1dP57776 281 aaKnown RBP8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Gjb4Q02738 266 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Klra6Q60653 266 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Mettl25Q6NXH8 597 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Prkab2Q6PAM0 271 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Klhdc10Q6PAR0 439 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Tas2r124Q7M718 309 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Galnt17Q7TT15 598 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 H6pdQ8CFX1 789 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Q8K2W9 541 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 IntS13Q8QZV7 732 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 DolkQ8R2Y3 534 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 GakQ99KY4 1305 aa8.35□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Myh8P13542 1937 aa8.34□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Myh7Q91Z83 1935 aa8.34□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Nup62clA2AG10 272 aa8.34□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Sema3fO88632 785 aa8.34□□□□□ -1.07
Bdnf-209ENSMUST00000111050 Art2aP17981 287 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms