RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 NUDCQ9Y266 331 aa10.18□□□□□ -0.78
CTNND1-231ENST00000532463 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
CTNND1-231ENST00000532463 NEFHP12036 1026 aa10.17□□□□□ -0.78
CTNND1-231ENST00000532463 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
CTNND1-231ENST00000532463 CWC15Q9P013 229 aaKnown RBP10.17□□□□□ -0.78
CTNND1-231ENST00000532463 ACBD3Q9H3P7 528 aa10.17□□□□□ -0.78
CTNND1-231ENST00000532463 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
CTNND1-231ENST00000532463 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
CTNND1-231ENST00000532463 RASSF8Q8NHQ8 419 aa10.16□□□□□ -0.78
CTNND1-231ENST00000532463 TPM1P09493 284 aa10.16□□□□□ -0.78
CTNND1-231ENST00000532463 AK7Q96M32 723 aa10.16□□□□□ -0.78
CTNND1-231ENST00000532463 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
CTNND1-231ENST00000532463 H0YHG0 523 aa10.15□□□□□ -0.78
CTNND1-231ENST00000532463 CREBRFQ8IUR6 639 aa10.15□□□□□ -0.78
CTNND1-231ENST00000532463 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-231ENST00000532463 KNSTRNQ9Y448 316 aa10.15□□□□□ -0.78
CTNND1-231ENST00000532463 CCDC66A2RUB6 948 aa10.15□□□□□ -0.79
CTNND1-231ENST00000532463 SLKQ9H2G2 1235 aaPredicted RBP10.15□□□□□ -0.79
CTNND1-231ENST00000532463 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
CTNND1-231ENST00000532463 PKNOX2Q96KN3 472 aa10.14□□□□□ -0.79
CTNND1-231ENST00000532463 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
CTNND1-231ENST00000532463 NEXNQ0ZGT2 675 aa10.14□□□□□ -0.79
CTNND1-231ENST00000532463 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
CTNND1-231ENST00000532463 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
CTNND1-231ENST00000532463 ARGLU1Q9NWB6 273 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-231ENST00000532463 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
CTNND1-231ENST00000532463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.791e-8■■□□□ 13.5
CTNND1-231ENST00000532463 TPM2P07951 284 aa10.12□□□□□ -0.79
CTNND1-231ENST00000532463 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTNND1-231ENST00000532463 HSP90B2PQ58FF3 399 aa10.12□□□□□ -0.79
CTNND1-231ENST00000532463 PLCD4Q9BRC7 762 aa10.12□□□□□ -0.79
CTNND1-231ENST00000532463 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
CTNND1-231ENST00000532463 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
CTNND1-231ENST00000532463 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
CTNND1-231ENST00000532463 TCERG1O14776 1098 aaKnown RBP10.11□□□□□ -0.79
CTNND1-231ENST00000532463 TPD52L1Q16890 204 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-231ENST00000532463 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
CTNND1-231ENST00000532463 HSP90AB3PQ58FF7 597 aa10.11□□□□□ -0.79
CTNND1-231ENST00000532463 GOLGA6L19H0YKK7 550 aa10.11□□□□□ -0.79
CTNND1-231ENST00000532463 PES1O00541 588 aaKnown RBP10.11□□□□□ -0.79
CTNND1-231ENST00000532463 MTERF4Q7Z6M4 381 aaKnown RBP10.1□□□□□ -0.79
CTNND1-231ENST00000532463 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
CTNND1-231ENST00000532463 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
CTNND1-231ENST00000532463 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-231ENST00000532463 BECN2A8MW95 431 aa10.08□□□□□ -0.8
CTNND1-231ENST00000532463 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
CTNND1-231ENST00000532463 PPP1R15AO75807 674 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-231ENST00000532463 ZRSR2Q15696 482 aaKnown RBP10.08□□□□□ -0.8
CTNND1-231ENST00000532463 DYDC1Q8WWB3 177 aa10.08□□□□□ -0.8
CTNND1-231ENST00000532463 SKOR2Q2VWA4 1001 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-231ENST00000532463 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
CTNND1-231ENST00000532463 TSPY4P0CV99 314 aa10.06□□□□□ -0.8
CTNND1-231ENST00000532463 TSPY10P0CW01 314 aa10.06□□□□□ -0.8
CTNND1-231ENST00000532463 INCENPQ9NQS7 918 aa10.06□□□□□ -0.8
CTNND1-231ENST00000532463 TIMELESSQ9UNS1 1208 aa10.06□□□□□ -0.8
CTNND1-231ENST00000532463 MARCH6O60337 910 aa10.05□□□□□ -0.8
CTNND1-231ENST00000532463 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
CTNND1-231ENST00000532463 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
CTNND1-231ENST00000532463 ERCC4Q92889 916 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-231ENST00000532463 KIF16BQ96L93 1317 aa10.05□□□□□ -0.8
CTNND1-231ENST00000532463 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
CTNND1-231ENST00000532463 NPM1P06748 294 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNND1-231ENST00000532463 IPO8O15397 1037 aaKnown RBP10.04□□□□□ -0.8
CTNND1-231ENST00000532463 TSPYL1Q9H0U9 437 aa10.04□□□□□ -0.8
CTNND1-231ENST00000532463 RWDD1Q9H446 243 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-231ENST00000532463 ANKRD20A12PQ8NF67 263 aa10.04□□□□□ -0.8
CTNND1-231ENST00000532463 CHMP4CQ96CF2 233 aa10.04□□□□□ -0.8
CTNND1-231ENST00000532463 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-231ENST00000532463 ATP6V1DQ9Y5K8 247 aa10.03□□□□□ -0.8
CTNND1-231ENST00000532463 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
CTNND1-231ENST00000532463 USP8P40818 1118 aa10.03□□□□□ -0.8
CTNND1-231ENST00000532463 GSE1Q14687 1217 aa10.02□□□□□ -0.8
CTNND1-231ENST00000532463 TAF3Q5VWG9 929 aa10.02□□□□□ -0.81
CTNND1-231ENST00000532463 ST18O60284 1047 aa10.02□□□□□ -0.81
CTNND1-231ENST00000532463 LEKR1Q6ZMV7 388 aa10.02□□□□□ -0.81
CTNND1-231ENST00000532463 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
CTNND1-231ENST00000532463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■■■■■ 38.5
CTNND1-231ENST00000532463 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
CTNND1-231ENST00000532463 FAM43AQ8N2R8 423 aa10.01□□□□□ -0.81
CTNND1-231ENST00000532463 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
CTNND1-231ENST00000532463 CCDC173Q0VFZ6 552 aa10.01□□□□□ -0.81
CTNND1-231ENST00000532463 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-231ENST00000532463 DIAPH3Q9NSV4 1193 aa10.01□□□□□ -0.81
CTNND1-231ENST00000532463 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
CTNND1-231ENST00000532463 MFAP1P55081 439 aaKnown RBP10□□□□□ -0.81
CTNND1-231ENST00000532463 APBB1O00213 710 aa10□□□□□ -0.81
CTNND1-231ENST00000532463 MYO6Q9UM54 1294 aa10□□□□□ -0.81
CTNND1-231ENST00000532463 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
CTNND1-231ENST00000532463 VPS53Q5VIR6 699 aa10□□□□□ -0.81
CTNND1-231ENST00000532463 DEF6Q9H4E7 631 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 H3BQV1 296 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 KIAA0754O94854 1291 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 PMFBP1Q8TBY8 1022 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 HDAC5Q9UQL6 1122 aa9.98□□□□□ -0.81
CTNND1-231ENST00000532463 SENP3Q9H4L4 574 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-231ENST00000532463 ODF2Q5BJF6 829 aa9.97□□□□□ -0.81
CTNND1-231ENST00000532463 CT47A1Q5JQC4 288 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms