RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 GORABQ5T7V8 394 aa3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 P3H3Q8IVL6 736 aa3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 ZNF622Q969S3 477 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 AMOTL2Q9Y2J4 779 aa3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 LOC102724159A0A0B4J2E5 919 aa3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 VGFO15240 615 aaPredicted RBP3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 ERCC3P19447 782 aa3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 TRHP20396 242 aaPredicted RBP3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 PWP2Q15269 919 aaKnown RBP3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 SALL2Q9Y467 1007 aaPredicted RBP3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 ACIN1Q9UKV3 1341 aaKnown RBP3.87□□□□□ -1.79
RNU6-56P-201ENST00000516986 IFNLR1Q8IU57 520 aaPredicted RBP3.86□□□□□ -1.79
RNU6-56P-201ENST00000516986 CCDC82Q8N4S0 544 aa3.86□□□□□ -1.79
RNU6-56P-201ENST00000516986 TRIM44Q96DX7 344 aaPredicted RBP3.86□□□□□ -1.79
RNU6-56P-201ENST00000516986 RNF216Q9NWF9 866 aaPredicted RBP3.86□□□□□ -1.79
RNU6-56P-201ENST00000516986 RIPOR2Q9Y4F9 1068 aa3.86□□□□□ -1.79
RNU6-56P-201ENST00000516986 ANP32CO43423 234 aa3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 CHGAP10645 457 aaKnown RBP3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 FLIIQ13045 1269 aa3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 SPTY2D1Q68D10 685 aaPredicted RBP3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 CASC1Q6TDU7 716 aa3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 CCER1Q8TC90 406 aaPredicted RBP3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 SECISBP2LQ93073 1101 aaKnown RBP3.85□□□□□ -1.79
RNU6-56P-201ENST00000516986 ZNF316A6NFI3 1004 aaPredicted RBP3.84□□□□□ -1.79
RNU6-56P-201ENST00000516986 NRDCO43847 1150 aa3.84□□□□□ -1.79
RNU6-56P-201ENST00000516986 ANP32AP39687 249 aaKnown RBP3.84□□□□□ -1.79
RNU6-56P-201ENST00000516986 NOP58Q9Y2X3 529 aaKnown RBP3.84□□□□□ -1.79
RNU6-56P-201ENST00000516986 CADPSQ9ULU8 1353 aa3.84□□□□□ -1.79
RNU6-56P-201ENST00000516986 FAM50AQ14320 339 aaKnown RBP3.83□□□□□ -1.8
RNU6-56P-201ENST00000516986 TMTC2Q8N394 836 aa3.83□□□□□ -1.8
RNU6-56P-201ENST00000516986 CEP120Q8N960 986 aa3.83□□□□□ -1.8
RNU6-56P-201ENST00000516986 SPATA32Q96LK8 384 aa3.83□□□□□ -1.8
RNU6-56P-201ENST00000516986 SLC24A3Q9HC58 644 aa3.83□□□□□ -1.8
RNU6-56P-201ENST00000516986 TPD52L2O43399 206 aaKnown RBP3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 WDR78Q5VTH9 848 aa3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 CCDC97Q96F63 343 aaPredicted RBP3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 HIRIP3Q9BW71 556 aaPredicted RBP3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 SERPINA10Q9UK55 444 aa3.82□□□□□ -1.8
RNU6-56P-201ENST00000516986 ANKRD62A6NC57 917 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 SMARCA5O60264 1052 aaPredicted RBP3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 MARCH6O60337 910 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 RALBP1Q15311 655 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 UBA5Q9GZZ9 404 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 TERF2IPQ9NYB0 399 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 DNAJC5BQ9UF47 199 aa3.81□□□□□ -1.8
RNU6-56P-201ENST00000516986 TTC36A6NLP5 189 aa3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 LIG1P18858 919 aa3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 TSHZ1Q6ZSZ6 1077 aa3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 FAM43BQ6ZT52 329 aaPredicted RBP3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 BARGINQ6ZT62 677 aa3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 ZC3H15Q8WU90 426 aaKnown RBP3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
RNU6-56P-201ENST00000516986 A6NJR5 290 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 RGL2O15211 777 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 TRAK2O60296 914 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 MCCD1P59942 119 aaPredicted RBP3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 TSR1Q2NL82 804 aaKnown RBP3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 NBPF1Q3BBV0 1214 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 RBM26Q5T8P6 1007 aaKnown RBP3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 NBPF11Q86T75 865 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 FAM9BQ8IZU0 186 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 IL27Q8NEV9 243 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 MORC4Q8TE76 937 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 SPOCK2Q92563 424 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 CHMP4BQ9H444 224 aaKnown RBP3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 PPME1Q9Y570 386 aa3.79□□□□□ -1.8
RNU6-56P-201ENST00000516986 ZRANB2O95218 330 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 APPP05067 770 aa3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 HSP90AA2PQ14568 343 aaPredicted RBP3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 RINLQ6ZS11 566 aa3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 RBM27Q9P2N5 1060 aaKnown RBP3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 MAGEC2Q9UBF1 373 aaPredicted RBP3.78□□□□□ -1.8
RNU6-56P-201ENST00000516986 GOLIM4O00461 696 aa3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 RRP9O43818 475 aaKnown RBP3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 BRD1O95696 1058 aa3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 ARID4AP29374 1257 aaPredicted RBP3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 NBPF20Q3BBV1 942 aa3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 LONRF3Q496Y0 759 aa3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 CCDC181Q5TID7 509 aa3.77□□□□□ -1.81
RNU6-56P-201ENST00000516986 ZC3H4Q9UPT8 1303 aaKnown RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 MYCNP04198 464 aaPredicted RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 HSP90AA1P07900 732 aaKnown RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 MMP14P50281 582 aa3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 KCNA1Q09470 495 aa3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 MKRN3Q13064 507 aaKnown RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 HDAC1Q13547 482 aaPredicted RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 MYBPC2Q14324 1141 aa3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 SETDB1Q15047 1291 aa3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 CC2D1BQ5T0F9 858 aaKnown RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 PIAS4Q8N2W9 510 aaPredicted RBP3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 RETREG2Q8NC44 543 aa3.76□□□□□ -1.81
RNU6-56P-201ENST00000516986 EIF3JO75822 258 aaKnown RBP3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 TCF3P15923 654 aa3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 KRBA2Q6ZNG9 492 aa3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 APBB1IPQ7Z5R6 666 aaPredicted RBP3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 SREK1Q8WXA9 508 aaKnown RBP3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 MTA3Q9BTC8 594 aa3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 METTL14Q9HCE5 456 aaKnown RBP3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 JADE2Q9NQC1 790 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms