RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
RPL13A-212ENST00000488946 ARID3CA6NKF2 412 aa20.62■□□□□ 0.89
RPL13A-212ENST00000488946 DNMT1P26358 1616 aaKnown RBP20.62■□□□□ 0.89
RPL13A-212ENST00000488946 UACAQ9BZF9 1416 aa20.62■□□□□ 0.89
RPL13A-212ENST00000488946 KIF14Q15058 1648 aa20.61■□□□□ 0.89
RPL13A-212ENST00000488946 ATP10BO94823 1461 aa20.55■□□□□ 0.88
RPL13A-212ENST00000488946 DAPK1P53355 1430 aa20.55■□□□□ 0.88
RPL13A-212ENST00000488946 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
RPL13A-212ENST00000488946 ROCK1Q13464 1354 aa20.53■□□□□ 0.88
RPL13A-212ENST00000488946 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.87
RPL13A-212ENST00000488946 ABCC5O15440 1437 aa20.51■□□□□ 0.87
RPL13A-212ENST00000488946 ABCC10Q5T3U5 1492 aa20.51■□□□□ 0.87
RPL13A-212ENST00000488946 CDC42BPAQ5VT25 1732 aa20.51■□□□□ 0.87
RPL13A-212ENST00000488946 CROCC2H7BZ55 1655 aa20.5■□□□□ 0.87
RPL13A-212ENST00000488946 KDM6BO15054 1643 aa20.5■□□□□ 0.87
RPL13A-212ENST00000488946 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
RPL13A-212ENST00000488946 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
RPL13A-212ENST00000488946 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
RPL13A-212ENST00000488946 ADGBQ8N7X0 1667 aa20.48■□□□□ 0.87
RPL13A-212ENST00000488946 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
RPL13A-212ENST00000488946 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
RPL13A-212ENST00000488946 MIER1Q8N108 512 aa20.44■□□□□ 0.86
RPL13A-212ENST00000488946 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
RPL13A-212ENST00000488946 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
RPL13A-212ENST00000488946 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
RPL13A-212ENST00000488946 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
RPL13A-212ENST00000488946 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
RPL13A-212ENST00000488946 DENND4BO75064 1496 aaPredicted RBP20.43■□□□□ 0.86
RPL13A-212ENST00000488946 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
RPL13A-212ENST00000488946 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
RPL13A-212ENST00000488946 CFDP1Q9UEE9 299 aaPredicted RBP20.41■□□□□ 0.86
RPL13A-212ENST00000488946 KDM5BQ9UGL1 1544 aa20.39■□□□□ 0.85
RPL13A-212ENST00000488946 SHANK2Q9UPX8 1470 aa20.38■□□□□ 0.85
RPL13A-212ENST00000488946 PREX2Q70Z35 1606 aa20.38■□□□□ 0.85
RPL13A-212ENST00000488946 ZCCHC11Q5TAX3 1644 aaKnown RBP20.36■□□□□ 0.85
RPL13A-212ENST00000488946 ARHGEF5Q12774 1597 aa20.35■□□□□ 0.85
RPL13A-212ENST00000488946 NCOA1Q15788 1441 aa20.34■□□□□ 0.85
RPL13A-212ENST00000488946 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
RPL13A-212ENST00000488946 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
RPL13A-212ENST00000488946 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
RPL13A-212ENST00000488946 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
RPL13A-212ENST00000488946 TTC37Q6PGP7 1564 aa20.3■□□□□ 0.84
RPL13A-212ENST00000488946 SAMD9LQ8IVG5 1584 aa20.3■□□□□ 0.84
RPL13A-212ENST00000488946 ASXL2Q76L83 1435 aa20.29■□□□□ 0.84
RPL13A-212ENST00000488946 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
RPL13A-212ENST00000488946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.27■□□□□ 0.841e-44■□□□□ 9.7
RPL13A-212ENST00000488946 ANKRD30AQ9BXX3 1397 aa20.27■□□□□ 0.84
RPL13A-212ENST00000488946 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
RPL13A-212ENST00000488946 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
RPL13A-212ENST00000488946 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
RPL13A-212ENST00000488946 C9orf84Q5VXU9 1444 aa20.25■□□□□ 0.83
RPL13A-212ENST00000488946 MYO5CQ9NQX4 1742 aa20.25■□□□□ 0.83
RPL13A-212ENST00000488946 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
RPL13A-212ENST00000488946 PZPP20742 1482 aa20.25■□□□□ 0.83
RPL13A-212ENST00000488946 KIF13AQ9H1H9 1805 aa20.24■□□□□ 0.83
RPL13A-212ENST00000488946 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
RPL13A-212ENST00000488946 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
RPL13A-212ENST00000488946 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
RPL13A-212ENST00000488946 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
RPL13A-212ENST00000488946 MAST1Q9Y2H9 1570 aa20.21■□□□□ 0.83
RPL13A-212ENST00000488946 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
RPL13A-212ENST00000488946 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
RPL13A-212ENST00000488946 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
RPL13A-212ENST00000488946 RPRD2Q5VT52 1461 aaKnown RBP20.18■□□□□ 0.82
RPL13A-212ENST00000488946 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
RPL13A-212ENST00000488946 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
RPL13A-212ENST00000488946 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
RPL13A-212ENST00000488946 GLI2P10070 1586 aa20.16■□□□□ 0.82
RPL13A-212ENST00000488946 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
RPL13A-212ENST00000488946 KIAA1107Q9UPP5 1409 aa20.14■□□□□ 0.81
RPL13A-212ENST00000488946 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
RPL13A-212ENST00000488946 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.81
RPL13A-212ENST00000488946 PLXNC1O60486 1568 aa20.13■□□□□ 0.81
RPL13A-212ENST00000488946 ARAP3Q8WWN8 1544 aa20.12■□□□□ 0.81
RPL13A-212ENST00000488946 KIF15Q9NS87 1388 aa20.12■□□□□ 0.81
RPL13A-212ENST00000488946 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
RPL13A-212ENST00000488946 TSPY4P0CV99 314 aa20.11■□□□□ 0.81
RPL13A-212ENST00000488946 TSPY10P0CW01 314 aa20.11■□□□□ 0.81
RPL13A-212ENST00000488946 PLCH2O75038 1416 aa20.1■□□□□ 0.81
RPL13A-212ENST00000488946 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.813e-8■■■■■ 33.5
RPL13A-212ENST00000488946 TSPOAP1O95153 1857 aa20.09■□□□□ 0.81
RPL13A-212ENST00000488946 FOXD1Q16676 465 aa20.09■□□□□ 0.81
RPL13A-212ENST00000488946 ABCC1P33527 1531 aa20.08■□□□□ 0.81
RPL13A-212ENST00000488946 MAP3K4Q9Y6R4 1608 aa20.07■□□□□ 0.8
RPL13A-212ENST00000488946 UNC13BO14795 1591 aa20.06■□□□□ 0.8
RPL13A-212ENST00000488946 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
RPL13A-212ENST00000488946 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
RPL13A-212ENST00000488946 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
RPL13A-212ENST00000488946 CD109Q6YHK3 1445 aa20.02■□□□□ 0.8
RPL13A-212ENST00000488946 NUP155O75694 1391 aa20.01■□□□□ 0.79
RPL13A-212ENST00000488946 PPRC1Q5VV67 1664 aaKnown RBP19.99■□□□□ 0.79
RPL13A-212ENST00000488946 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
RPL13A-212ENST00000488946 FAM135AQ9P2D6 1515 aa19.99■□□□□ 0.79
RPL13A-212ENST00000488946 PKD2Q13563 968 aa19.98■□□□□ 0.79
RPL13A-212ENST00000488946 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
RPL13A-212ENST00000488946 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
RPL13A-212ENST00000488946 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
RPL13A-212ENST00000488946 MAGI2Q86UL8 1455 aa19.97■□□□□ 0.79
RPL13A-212ENST00000488946 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
RPL13A-212ENST00000488946 ERBINQ96RT1 1412 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms