RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 NECTIN2Q92692 538 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF622Q969S3 477 aaKnown RBP eCLIP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF830Q96NB3 372 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 DNAJC2Q99543 621 aaKnown RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZHX1Q9UKY1 873 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 HDAC5Q9UQL6 1122 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FANCIQ9NVI1 1328 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 NPM1P06748 294 aaKnown RBP eCLIP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 CHRM1P11229 460 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 SETQ01105 290 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 CC2D1BQ5T0F9 858 aaKnown RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 AXDND1Q5T1B0 1012 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 FAM177A1Q8N128 213 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 FAM43AQ8N2R8 423 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 KCTD17Q8N5Z5 321 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PHF23Q9BUL5 403 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PRDM4Q9UKN5 801 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 MTMR7Q9Y216 660 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 DCAF1Q9Y4B6 1507 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PLEKHD1A6NEE1 506 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PHF14O94880 888 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ARID4AP29374 1257 aaPredicted RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ANP32AP39687 249 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 SEMA3FQ13275 785 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 HSP90AB4PQ58FF6 505 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ARMCX6Q7L4S7 300 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 NGEFQ8N5V2 710 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 RGS22Q8NE09 1264 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PIK3R5Q8WYR1 880 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 CHMP4CQ96CF2 233 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PNNQ9H307 717 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 SLC52A1Q9NWF4 448 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB12Q9Y330 459 aaPredicted RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 LAS1LQ9Y4W2 734 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 C11orf95C9JLR9 678 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 GOLIM4O00461 696 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB22O15209 634 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF500O60304 480 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 PAK3O75914 559 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TNNT1P13805 278 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 POLD1P28340 1107 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 RGL3Q3MIN7 710 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 PPP4R3BQ5MIZ7 849 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CC2D2BQ6DHV5 1058 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 EP400NLQ6ZTU2 488 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 NOL8Q76FK4 1167 aaKnown RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CREBRFQ8IUR6 639 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 MIER1Q8N108 512 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF513Q8N8E2 541 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 BANK1Q8NDB2 785 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TRIM41Q8WV44 630 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB9Q96C00 473 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TRIM44Q96DX7 344 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 DDRGK1Q96HY6 314 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TMEM51Q9NW97 253 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB47Q9UFB7 747 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CENPJQ9HC77 1338 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 APBB1O00213 710 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MPHOSPH10O00566 681 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TCERG1O14776 1098 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 IRF6O14896 467 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 VGFO15240 615 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MAFGO15525 162 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TPM2P07951 284 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 LMOD3Q0VAK6 560 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 GSE1Q14687 1217 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RALBP1Q15311 655 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NEUROD2Q15784 382 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NBPF1Q3BBV0 1214 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NBPF20Q3BBV1 942 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 HSP90AB3PQ58FF7 597 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TAF3Q5VWG9 929 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CASC1Q6TDU7 716 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RINLQ6ZS11 566 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 SMAP1Q8IYB5 467 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TMTC2Q8N394 836 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CCDC97Q96F63 343 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 GZF1Q9H116 711 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TMX4Q9H1E5 349 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 PDCL3Q9H2J4 239 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 C1orf115Q9H7X2 142 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RRAGDQ9NQL2 400 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 STK26Q9P289 416 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CGNQ9P2M7 1197 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 SH3BP1Q9Y3L3 701 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MRVI1Q9Y6F6 885 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 WASHC2AQ641Q2 1341 aa1.15□□□□□ -2.22
RPL39P28-201ENST00000465655 WASHC2CQ9Y4E1 1318 aa1.15□□□□□ -2.22
RPL39P28-201ENST00000465655 LOC102724159A0A0B4J2E5 919 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6CA6NDK9 693 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6BA6NDN3 693 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 ERICH4A6NGS2 130 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC36A6NLP5 189 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM6-TRIM34B2RNG4 842 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 DHX16O60231 1041 aaKnown RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 SMARCA5O60264 1052 aaPredicted RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 MARCH6O60337 910 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 BRD1O95696 1058 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 PRR29P0C7W0 189 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms