RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 NECTIN2Q92692 538 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF622Q969S3 477 aaKnown RBP eCLIP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF830Q96NB3 372 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 DNAJC2Q99543 621 aaKnown RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ZHX1Q9UKY1 873 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 HDAC5Q9UQL6 1122 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FANCIQ9NVI1 1328 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 NPM1P06748 294 aaKnown RBP eCLIP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 CHRM1P11229 460 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 SETQ01105 290 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 CC2D1BQ5T0F9 858 aaKnown RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 AXDND1Q5T1B0 1012 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 FAM177A1Q8N128 213 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 FAM43AQ8N2R8 423 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 KCTD17Q8N5Z5 321 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PHF23Q9BUL5 403 aaPredicted RBP1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PRDM4Q9UKN5 801 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 MTMR7Q9Y216 660 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 DCAF1Q9Y4B6 1507 aa1.19□□□□□ -2.22
RPL39P28-201ENST00000465655 PLEKHD1A6NEE1 506 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PHF14O94880 888 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ARID4AP29374 1257 aaPredicted RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ANP32AP39687 249 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 SEMA3FQ13275 785 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 HSP90AB4PQ58FF6 505 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ARMCX6Q7L4S7 300 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 NGEFQ8N5V2 710 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 RGS22Q8NE09 1264 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PIK3R5Q8WYR1 880 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 CHMP4CQ96CF2 233 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 PNNQ9H307 717 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 SLC52A1Q9NWF4 448 aa1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB12Q9Y330 459 aaPredicted RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 LAS1LQ9Y4W2 734 aaKnown RBP1.18□□□□□ -2.22
RPL39P28-201ENST00000465655 C11orf95C9JLR9 678 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 GOLIM4O00461 696 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB22O15209 634 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF500O60304 480 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 PAK3O75914 559 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TNNT1P13805 278 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 POLD1P28340 1107 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 RGL3Q3MIN7 710 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 PPP4R3BQ5MIZ7 849 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CC2D2BQ6DHV5 1058 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 EP400NLQ6ZTU2 488 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 NOL8Q76FK4 1167 aaKnown RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CREBRFQ8IUR6 639 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 MIER1Q8N108 512 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF513Q8N8E2 541 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 BANK1Q8NDB2 785 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TRIM41Q8WV44 630 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB9Q96C00 473 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TRIM44Q96DX7 344 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 DDRGK1Q96HY6 314 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 TMEM51Q9NW97 253 aa1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 ZBTB47Q9UFB7 747 aaPredicted RBP1.17□□□□□ -2.22
RPL39P28-201ENST00000465655 CENPJQ9HC77 1338 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 APBB1O00213 710 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MPHOSPH10O00566 681 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TCERG1O14776 1098 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 IRF6O14896 467 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 VGFO15240 615 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MAFGO15525 162 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TPM2P07951 284 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 LMOD3Q0VAK6 560 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 GSE1Q14687 1217 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RALBP1Q15311 655 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NEUROD2Q15784 382 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NBPF1Q3BBV0 1214 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 NBPF20Q3BBV1 942 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 HSP90AB3PQ58FF7 597 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TAF3Q5VWG9 929 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CASC1Q6TDU7 716 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RINLQ6ZS11 566 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 SMAP1Q8IYB5 467 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TMTC2Q8N394 836 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CCDC97Q96F63 343 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 GZF1Q9H116 711 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 TMX4Q9H1E5 349 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 PDCL3Q9H2J4 239 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 C1orf115Q9H7X2 142 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 RRAGDQ9NQL2 400 aaPredicted RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 STK26Q9P289 416 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 CGNQ9P2M7 1197 aaKnown RBP1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 SH3BP1Q9Y3L3 701 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 MRVI1Q9Y6F6 885 aa1.16□□□□□ -2.22
RPL39P28-201ENST00000465655 WASHC2AQ641Q2 1341 aa1.15□□□□□ -2.22
RPL39P28-201ENST00000465655 WASHC2CQ9Y4E1 1318 aa1.15□□□□□ -2.22
RPL39P28-201ENST00000465655 LOC102724159A0A0B4J2E5 919 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6CA6NDK9 693 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6BA6NDN3 693 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 ERICH4A6NGS2 130 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC36A6NLP5 189 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM6-TRIM34B2RNG4 842 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 DHX16O60231 1041 aaKnown RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 SMARCA5O60264 1052 aaPredicted RBP1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 MARCH6O60337 910 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 BRD1O95696 1058 aa1.15□□□□□ -2.23
RPL39P28-201ENST00000465655 PRR29P0C7W0 189 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms