RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 CWC15Q9P013 229 aaKnown RBP10.51□□□□□ -0.73
NCKAP1-202ENST00000361354 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
NCKAP1-202ENST00000361354 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
NCKAP1-202ENST00000361354 CDR1P51861 262 aa10.51□□□□□ -0.73
NCKAP1-202ENST00000361354 CCAR2Q8N163 923 aaKnown RBP10.5□□□□□ -0.73
NCKAP1-202ENST00000361354 AK7Q96M32 723 aa10.5□□□□□ -0.73
NCKAP1-202ENST00000361354 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
NCKAP1-202ENST00000361354 DCTN1Q14203 1278 aa10.5□□□□□ -0.73
NCKAP1-202ENST00000361354 KAT6BQ8WYB5 2073 aa10.5□□□□□ -0.73
NCKAP1-202ENST00000361354 RUFY1Q96T51 708 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 ACBD3Q9H3P7 528 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 TPM2P07951 284 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 RDXP35241 583 aaKnown RBP10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 TSPY4P0CV99 314 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 TSPY10P0CW01 314 aa10.49□□□□□ -0.73
NCKAP1-202ENST00000361354 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
NCKAP1-202ENST00000361354 KIF16BQ96L93 1317 aa10.48□□□□□ -0.73
NCKAP1-202ENST00000361354 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
NCKAP1-202ENST00000361354 B4GALNT3Q6L9W6 998 aa10.47□□□□□ -0.73
NCKAP1-202ENST00000361354 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
NCKAP1-202ENST00000361354 NEUROD2Q15784 382 aa10.47□□□□□ -0.73
NCKAP1-202ENST00000361354 CREBRFQ8IUR6 639 aa10.47□□□□□ -0.73
NCKAP1-202ENST00000361354 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
NCKAP1-202ENST00000361354 PES1O00541 588 aaKnown RBP10.46□□□□□ -0.73
NCKAP1-202ENST00000361354 CHIC2Q9UKJ5 165 aa10.46□□□□□ -0.73
NCKAP1-202ENST00000361354 GOLGA6L19H0YKK7 550 aa10.46□□□□□ -0.74
NCKAP1-202ENST00000361354 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.74
NCKAP1-202ENST00000361354 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
NCKAP1-202ENST00000361354 ARGLU1Q9NWB6 273 aaPredicted RBP10.45□□□□□ -0.74
NCKAP1-202ENST00000361354 CCDC66A2RUB6 948 aa10.45□□□□□ -0.74
NCKAP1-202ENST00000361354 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
NCKAP1-202ENST00000361354 H0YHG0 523 aa10.45□□□□□ -0.74
NCKAP1-202ENST00000361354 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
NCKAP1-202ENST00000361354 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
NCKAP1-202ENST00000361354 TCERG1O14776 1098 aaKnown RBP10.44□□□□□ -0.74
NCKAP1-202ENST00000361354 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.44□□□□□ -0.74
NCKAP1-202ENST00000361354 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.43□□□□□ -0.74
NCKAP1-202ENST00000361354 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
NCKAP1-202ENST00000361354 ST18O60284 1047 aa10.43□□□□□ -0.74
NCKAP1-202ENST00000361354 HSP90B2PQ58FF3 399 aa10.42□□□□□ -0.74
NCKAP1-202ENST00000361354 IPO8O15397 1037 aaKnown RBP10.42□□□□□ -0.74
NCKAP1-202ENST00000361354 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
NCKAP1-202ENST00000361354 BECN2A8MW95 431 aa10.41□□□□□ -0.74
NCKAP1-202ENST00000361354 ANKRD20A12PQ8NF67 263 aa10.4□□□□□ -0.74
NCKAP1-202ENST00000361354 SF3A1Q15459 793 aaKnown RBP10.4□□□□□ -0.74
NCKAP1-202ENST00000361354 NEXNQ0ZGT2 675 aa10.4□□□□□ -0.75
NCKAP1-202ENST00000361354 ZRSR2Q15696 482 aaKnown RBP10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 ZNF592Q92610 1267 aa10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 U2SURPO15042 1029 aaKnown RBP10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
NCKAP1-202ENST00000361354 CARD11Q9BXL7 1154 aa10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 SKOR2Q2VWA4 1001 aaPredicted RBP10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 FAM13BQ9NYF5 915 aa10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 NEFHP12036 1026 aa10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 INCENPQ9NQS7 918 aa10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
NCKAP1-202ENST00000361354 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 H3BQV1 296 aa10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 IFFO2Q5TF58 517 aa10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 MARCH6O60337 910 aa10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 CHMP4AQ9BY43 222 aa10.37□□□□□ -0.75
NCKAP1-202ENST00000361354 RWDD1Q9H446 243 aaPredicted RBP10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 DYDC1Q8WWB3 177 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 HSP90AB3PQ58FF7 597 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 MFAP1P55081 439 aaKnown RBP10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 PMFBP1Q8TBY8 1022 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
NCKAP1-202ENST00000361354 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 APBB1O00213 710 aa10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 ITPRIPQ8IWB1 547 aa10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 HOOK1Q9UJC3 728 aaKnown RBP10.35□□□□□ -0.75
NCKAP1-202ENST00000361354 LEKR1Q6ZMV7 388 aa10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 CCDC173Q0VFZ6 552 aa10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 ERCC4Q92889 916 aaPredicted RBP10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 PLCD4Q9BRC7 762 aa10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.753e-24■■■■■ 52.4
NCKAP1-202ENST00000361354 GOLGA6L7A0A1B0GV03 622 aa10.34□□□□□ -0.75
NCKAP1-202ENST00000361354 ODF2Q5BJF6 829 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 MNS1Q8NEH6 495 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 POGKQ9P215 609 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
NCKAP1-202ENST00000361354 ANO8Q9HCE9 1232 aaPredicted RBP10.32□□□□□ -0.76
NCKAP1-202ENST00000361354 CC2D1BQ5T0F9 858 aaKnown RBP10.32□□□□□ -0.76
NCKAP1-202ENST00000361354 CT47A1Q5JQC4 288 aaPredicted RBP10.32□□□□□ -0.76
NCKAP1-202ENST00000361354 CAGE1Q8TC20 777 aa10.32□□□□□ -0.76
NCKAP1-202ENST00000361354 PCMTD1Q96MG8 357 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms