RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
SAMM50-201ENST00000350028 ABCC5O15440 1437 aa24.11■■□□□ 1.45
SAMM50-201ENST00000350028 KIF14Q15058 1648 aa24.11■■□□□ 1.45
SAMM50-201ENST00000350028 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
SAMM50-201ENST00000350028 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
SAMM50-201ENST00000350028 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
SAMM50-201ENST00000350028 KDM6BO15054 1643 aa24.04■■□□□ 1.44
SAMM50-201ENST00000350028 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
SAMM50-201ENST00000350028 ABCC10Q5T3U5 1492 aa24.03■■□□□ 1.44
SAMM50-201ENST00000350028 MIER1Q8N108 512 aa24.03■■□□□ 1.44
SAMM50-201ENST00000350028 TRIM52Q96A61 297 aa24.01■■□□□ 1.43
SAMM50-201ENST00000350028 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
SAMM50-201ENST00000350028 CDC42BPAQ5VT25 1732 aa24■■□□□ 1.43
SAMM50-201ENST00000350028 ADGBQ8N7X0 1667 aa23.98■■□□□ 1.43
SAMM50-201ENST00000350028 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
SAMM50-201ENST00000350028 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
SAMM50-201ENST00000350028 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
SAMM50-201ENST00000350028 CROCC2H7BZ55 1655 aa23.96■■□□□ 1.43
SAMM50-201ENST00000350028 ADGRL2O95490 1459 aa23.95■■□□□ 1.42
SAMM50-201ENST00000350028 CENPBP07199 599 aaPredicted RBP23.95■■□□□ 1.42
SAMM50-201ENST00000350028 MPHOSPH9Q99550 1183 aa23.95■■□□□ 1.42
SAMM50-201ENST00000350028 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
SAMM50-201ENST00000350028 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.42
SAMM50-201ENST00000350028 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
SAMM50-201ENST00000350028 ABCC2Q92887 1545 aa23.9■■□□□ 1.42
SAMM50-201ENST00000350028 ANKRD30AQ9BXX3 1397 aa23.89■■□□□ 1.41
SAMM50-201ENST00000350028 SHANK2Q9UPX8 1470 aa23.88■■□□□ 1.41
SAMM50-201ENST00000350028 UHRF1BP1LA0JNW5 1464 aa23.84■■□□□ 1.41
SAMM50-201ENST00000350028 ARHGEF5Q12774 1597 aa23.84■■□□□ 1.41
SAMM50-201ENST00000350028 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
SAMM50-201ENST00000350028 KDM5BQ9UGL1 1544 aa23.82■■□□□ 1.4
SAMM50-201ENST00000350028 CDC42BPBQ9Y5S2 1711 aa23.8■■□□□ 1.4
SAMM50-201ENST00000350028 ANKRD30BQ9BXX2 1392 aa23.8■■□□□ 1.4
SAMM50-201ENST00000350028 C9orf84Q5VXU9 1444 aa23.79■■□□□ 1.4
SAMM50-201ENST00000350028 TSPY4P0CV99 314 aa23.79■■□□□ 1.4
SAMM50-201ENST00000350028 TSPY10P0CW01 314 aa23.79■■□□□ 1.4
SAMM50-201ENST00000350028 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
SAMM50-201ENST00000350028 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
SAMM50-201ENST00000350028 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
SAMM50-201ENST00000350028 PZPP20742 1482 aa23.77■■□□□ 1.4
SAMM50-201ENST00000350028 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
SAMM50-201ENST00000350028 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
SAMM50-201ENST00000350028 SAMD9LQ8IVG5 1584 aa23.76■■□□□ 1.39
SAMM50-201ENST00000350028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.75■■□□□ 1.39
SAMM50-201ENST00000350028 ZCCHC11Q5TAX3 1644 aaKnown RBP23.75■■□□□ 1.39
SAMM50-201ENST00000350028 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
SAMM50-201ENST00000350028 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.392e-7■■■■□ 25.4
SAMM50-201ENST00000350028 CCDC141Q6ZP82 1450 aa23.73■■□□□ 1.39
SAMM50-201ENST00000350028 TTC37Q6PGP7 1564 aa23.72■■□□□ 1.39
SAMM50-201ENST00000350028 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
SAMM50-201ENST00000350028 FOXD1Q16676 465 aa23.72■■□□□ 1.39
SAMM50-201ENST00000350028 MYO5CQ9NQX4 1742 aa23.71■■□□□ 1.39
SAMM50-201ENST00000350028 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
SAMM50-201ENST00000350028 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
SAMM50-201ENST00000350028 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
SAMM50-201ENST00000350028 KIAA1107Q9UPP5 1409 aa23.68■■□□□ 1.38
SAMM50-201ENST00000350028 L3MBTL2Q969R5 705 aa23.67■■□□□ 1.38
SAMM50-201ENST00000350028 DNAJC5Q9H3Z4 198 aa23.67■■□□□ 1.38
SAMM50-201ENST00000350028 MAST1Q9Y2H9 1570 aa23.66■■□□□ 1.38
SAMM50-201ENST00000350028 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
SAMM50-201ENST00000350028 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
SAMM50-201ENST00000350028 DDX10Q13206 875 aaKnown RBP23.65■■□□□ 1.38
SAMM50-201ENST00000350028 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
SAMM50-201ENST00000350028 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
SAMM50-201ENST00000350028 PLCH2O75038 1416 aa23.62■■□□□ 1.37
SAMM50-201ENST00000350028 KCNH8Q96L42 1107 aa23.62■■□□□ 1.37
SAMM50-201ENST00000350028 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
SAMM50-201ENST00000350028 NUP155O75694 1391 aa23.61■■□□□ 1.37
SAMM50-201ENST00000350028 PKD2Q13563 968 aa23.61■■□□□ 1.37
SAMM50-201ENST00000350028 EFCAB2Q5VUJ9 269 aa23.57■■□□□ 1.36
SAMM50-201ENST00000350028 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
SAMM50-201ENST00000350028 EIF4G2P78344 907 aaKnown RBP eCLIP23.55■■□□□ 1.36
SAMM50-201ENST00000350028 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
SAMM50-201ENST00000350028 HSPA5P11021 654 aaKnown RBP23.53■■□□□ 1.36
SAMM50-201ENST00000350028 ARAP3Q8WWN8 1544 aa23.53■■□□□ 1.36
SAMM50-201ENST00000350028 WDR7Q9Y4E6 1490 aa23.52■■□□□ 1.36
SAMM50-201ENST00000350028 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
SAMM50-201ENST00000350028 ARHGEF12Q9NZN5 1544 aa23.5■■□□□ 1.35
SAMM50-201ENST00000350028 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
SAMM50-201ENST00000350028 ABCC1P33527 1531 aa23.49■■□□□ 1.35
SAMM50-201ENST00000350028 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
SAMM50-201ENST00000350028 UNC13BO14795 1591 aa23.48■■□□□ 1.35
SAMM50-201ENST00000350028 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
SAMM50-201ENST00000350028 FAM135AQ9P2D6 1515 aa23.46■■□□□ 1.35
SAMM50-201ENST00000350028 ANP32CO43423 234 aa23.45■■□□□ 1.34
SAMM50-201ENST00000350028 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
SAMM50-201ENST00000350028 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
SAMM50-201ENST00000350028 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
SAMM50-201ENST00000350028 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.34
SAMM50-201ENST00000350028 RTEL1-TNFRSF6BF6WH68 1400 aa23.39■■□□□ 1.34
SAMM50-201ENST00000350028 TRAPPC8Q9Y2L5 1435 aa23.39■■□□□ 1.34
SAMM50-201ENST00000350028 IQGAP3Q86VI3 1631 aa23.39■■□□□ 1.33
SAMM50-201ENST00000350028 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
SAMM50-201ENST00000350028 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
SAMM50-201ENST00000350028 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
SAMM50-201ENST00000350028 SPAG9O60271 1321 aaKnown RBP23.34■■□□□ 1.33
SAMM50-201ENST00000350028 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
SAMM50-201ENST00000350028 FANCAO15360 1455 aa23.33■■□□□ 1.32
SAMM50-201ENST00000350028 POLR1AO95602 1720 aaPredicted RBP23.32■■□□□ 1.32
SAMM50-201ENST00000350028 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms