RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C SQT1P35184 431 aa3.47□□□□□ -1.85
VPS53YJL029C GGC1P38988 300 aa3.47□□□□□ -1.85
VPS53YJL029C DHH1P39517 506 aaKnown RBP3.47□□□□□ -1.85
VPS53YJL029C YHB1P39676 399 aaKnown RBP3.47□□□□□ -1.85
VPS53YJL029C EMP65P40085 556 aa3.47□□□□□ -1.85
VPS53YJL029C MNT3P40549 630 aa3.47□□□□□ -1.85
VPS53YJL029C COS12P53053 380 aa3.47□□□□□ -1.85
VPS53YJL029C MTQ2Q03920 221 aaPredicted RBP3.47□□□□□ -1.85
VPS53YJL029C SSL1Q04673 461 aaPredicted RBP3.47□□□□□ -1.85
VPS53YJL029C RSC3Q06639 885 aa3.47□□□□□ -1.85
VPS53YJL029C SLP1Q12232 587 aa3.47□□□□□ -1.85
VPS53YJL029C RUD3Q12234 484 aaKnown RBP3.47□□□□□ -1.85
VPS53YJL029C ILV2P07342 687 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C FUM1P08417 488 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C HOM3P10869 527 aa3.46□□□□□ -1.86
VPS53YJL029C PRI2P20457 528 aa3.46□□□□□ -1.86
VPS53YJL029C SPS22P25380 463 aa3.46□□□□□ -1.86
VPS53YJL029C VMA3P25515 160 aa3.46□□□□□ -1.86
VPS53YJL029C MCM5P29496 775 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C CRM1P30822 1084 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C ETR1P38071 380 aa3.46□□□□□ -1.86
VPS53YJL029C YRO2P38079 344 aa3.46□□□□□ -1.86
VPS53YJL029C UTP18P40362 594 aaPredicted RBP3.46□□□□□ -1.86
VPS53YJL029C PRP31P49704 494 aaPredicted RBP3.46□□□□□ -1.86
VPS53YJL029C CLD1P53264 445 aa3.46□□□□□ -1.86
VPS53YJL029C ALG12P53730 551 aa3.46□□□□□ -1.86
VPS53YJL029C YPL109CQ02981 657 aa3.46□□□□□ -1.86
VPS53YJL029C SIZ1Q04195 904 aa3.46□□□□□ -1.86
VPS53YJL029C TDA5Q06417 326 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C MRH1Q12117 320 aaPredicted RBP3.46□□□□□ -1.86
VPS53YJL029C AHA1Q12449 350 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C RGS2Q99188 309 aa3.46□□□□□ -1.86
VPS53YJL029C PHO5P00635 467 aa3.46□□□□□ -1.86
VPS53YJL029C HEM2P05373 342 aa3.46□□□□□ -1.86
VPS53YJL029C MCM1P11746 286 aa3.46□□□□□ -1.86
VPS53YJL029C MGM101P32787 269 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C SFC1P33303 322 aa3.46□□□□□ -1.86
VPS53YJL029C SOL2P37262 315 aa3.46□□□□□ -1.86
VPS53YJL029C LYS1P38998 373 aaRIP-Chip data3.46□□□□□ -1.86 RIP-Chip
VPS53YJL029C NPT1P39683 429 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C GCV1P48015 400 aa3.46□□□□□ -1.86
VPS53YJL029C PAN2P53010 1115 aaPredicted RBP3.46□□□□□ -1.86
VPS53YJL029C SUT1P53032 299 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C CSL4P53859 292 aaPredicted RBP3.46□□□□□ -1.86
VPS53YJL029C HPT1Q04178 221 aaKnown RBP3.46□□□□□ -1.86
VPS53YJL029C VHS3Q08438 674 aa3.46□□□□□ -1.86
VPS53YJL029C GUP2Q08929 609 aa3.46□□□□□ -1.86
VPS53YJL029C WTM2Q12206 467 aa3.46□□□□□ -1.86
VPS53YJL029C HSP42Q12329 375 aa3.46□□□□□ -1.86
VPS53YJL029C PRP16P15938 1071 aaPredicted RBP3.45□□□□□ -1.86
VPS53YJL029C YCK2P23292 546 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C PHA2P32452 334 aa3.45□□□□□ -1.86
VPS53YJL029C ATP11P32453 318 aa3.45□□□□□ -1.86
VPS53YJL029C FMP46P36141 133 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C FAU1P40099 211 aa3.45□□□□□ -1.86
VPS53YJL029C YFR020WP43600 232 aa3.45□□□□□ -1.86
VPS53YJL029C ARC1P46672 376 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C ESF2P53743 316 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C IST1P53843 298 aaPredicted RBP3.45□□□□□ -1.86
VPS53YJL029C YET3Q07451 203 aa3.45□□□□□ -1.86
VPS53YJL029C GLO4Q12320 285 aa3.45□□□□□ -1.86
VPS53YJL029C ACC1Q00955 2233 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C SEC53P07283 254 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C SPS1P08458 490 aa3.45□□□□□ -1.86
VPS53YJL029C PDC5P16467 563 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C LDB16P25587 256 aa3.45□□□□□ -1.86
VPS53YJL029C IMG1P25626 169 aa3.45□□□□□ -1.86
VPS53YJL029C NAB2P32505 525 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86 RIP-Chip
VPS53YJL029C RPS1AP33442 255 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C DEF1P35732 738 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C YBR071WP38243 211 aa3.45□□□□□ -1.86
VPS53YJL029C SMX2P40204 77 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C YGR053CP53234 283 aa3.45□□□□□ -1.86
VPS53YJL029C ARE2P53629 642 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C ECM9Q02202 377 aa3.45□□□□□ -1.86
VPS53YJL029C HOS3Q02959 697 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C CTK1Q03957 528 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C MUS81Q04149 632 aaPredicted RBP3.45□□□□□ -1.86
VPS53YJL029C RRP45Q05636 305 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C VAM6Q07468 1049 aa3.45□□□□□ -1.86
VPS53YJL029C MDY2Q12285 212 aa3.45□□□□□ -1.86
VPS53YJL029C PNO1Q99216 274 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C HRP1Q99383 534 aaKnown RBP3.45□□□□□ -1.86
VPS53YJL029C RPS31P05759 152 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C RPB2P08518 1224 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C CMP2P14747 604 aa3.44□□□□□ -1.86
VPS53YJL029C ILV6P25605 309 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C YCR090CP25654 182 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C ADE1P27616 306 aa3.44□□□□□ -1.86
VPS53YJL029C BUD14P27637 709 aa3.44□□□□□ -1.86
VPS53YJL029C CYM1P32898 989 aa3.44□□□□□ -1.86
VPS53YJL029C RRP14P36080 434 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C EFM1P38732 585 aa3.44□□□□□ -1.86
VPS53YJL029C CFD1P40558 293 aa3.44□□□□□ -1.86
VPS53YJL029C HOC1P47124 396 aa3.44□□□□□ -1.86
VPS53YJL029C STE23Q06010 1027 aa3.44□□□□□ -1.86
VPS53YJL029C YEH1Q07804 573 aa3.44□□□□□ -1.86
VPS53YJL029C PUS9Q12069 462 aa3.44□□□□□ -1.86
VPS53YJL029C SPT3P06844 337 aa3.44□□□□□ -1.86
VPS53YJL029C SSC1P0CS90 654 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 151 ms