RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 RNF41Q9H4P4 317 aaPredicted RBP9.45□□□□□ -0.9
SPTAN1-213ENST00000627809 XPNPEP3Q9NQH7 507 aa9.45□□□□□ -0.9
SPTAN1-213ENST00000627809 BRPF3Q9ULD4 1205 aa9.45□□□□□ -0.9
SPTAN1-213ENST00000627809 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 PRC1O43663 620 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 EVI5O60447 810 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 HOXA13P31271 388 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 NT5C2P49902 561 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 ALDH5A1P51649 535 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 OAZ1P54368 228 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 PSMC6P62333 389 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 GDF15Q99988 308 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 GNEQ9Y223 722 aaKnown RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 UMODL1Q5DID0 1318 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 CHD7Q9P2D1 2997 aa9.44□□□□□ -0.9
SPTAN1-213ENST00000627809 DNM1LO00429 736 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 RGS20O76081 388 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 TRDNQ13061 729 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 SNX17Q15036 470 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 KCNA10Q16322 511 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 TMEM67Q5HYA8 995 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 C9orf50Q5SZB4 431 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 HOMER1Q86YM7 354 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 ZNF654Q8IZM8 581 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 ANKLE1Q8NAG6 615 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 SYTL5Q8TDW5 730 aaPredicted RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 MORC4Q8TE76 937 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 TTC14Q96N46 770 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 KRT23Q9C075 422 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 PDLIM7Q9NR12 457 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
SPTAN1-213ENST00000627809 PRUNE2Q8WUY3 3088 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 KLRF2D3W0D1 207 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 AKR1A1P14550 325 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 EDNRBP24530 442 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 EXOSC10Q01780 885 aaKnown RBP9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 TLE2Q04725 743 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 FUT2Q10981 343 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 KRT32Q14532 448 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 SLC39A5Q6ZMH5 540 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 Q7L0L9 218 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
SPTAN1-213ENST00000627809 MYO9BQ13459 2157 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 WDR19Q8NEZ3 1342 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 SEC24BO95487 1268 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 ASGR1P07306 291 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 RARBP10826 455 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CDC27P30260 824 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 HSPA4P34932 840 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 ACLYP53396 1101 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 SEMA3FQ13275 785 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 HIC1Q14526 733 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 WTAPQ15007 396 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CCDC178Q5BJE1 867 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 FAM109BQ6ICB4 259 aaPredicted RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 RNF207Q6ZRF8 634 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 RALYLQ86SE5 291 aaKnown RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 NCOA7Q8NI08 942 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 KCNB2Q92953 911 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CTAGE1Q96RT6 745 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 RIOX1Q9H6W3 641 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
SPTAN1-213ENST00000627809 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 GJA9P57773 515 aa9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 SP2Q02086 613 aa9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 UBE2SQ16763 222 aa9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 LY6KQ17RY6 165 aa9.4□□□□□ -0.9
SPTAN1-213ENST00000627809 GPATCH4Q5T3I0 446 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms