RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 IKQ13123 557 aaPredicted RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 SLFN13Q68D06 897 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 SGMS1Q86VZ5 419 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 LRRC47Q8N1G4 583 aaKnown RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 FBXL16Q8N461 479 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 CTCFLQ8NI51 663 aaPredicted RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 CHURC1Q8WUH1 139 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 TBC1D32Q96NH3 1257 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 MAP3K14Q99558 947 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 TMEM47Q9BQJ4 181 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 TANGO6Q9C0B7 1094 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 HOXC10Q9NYD6 342 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 PNMA2Q9UL42 364 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
AC004009.3-201ENST00000624160 GREB1LQ9C091 1923 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 MYPNQ86TC9 1320 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 A0A1W2PRG0 241 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 DHX16O60231 1041 aaKnown RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 PARP1P09874 1014 aaKnown RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 BMP3P12645 472 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 VCAM1P19320 739 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 VARSP26640 1264 aaKnown RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 HOXA7P31268 230 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 MCM2P49736 904 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 GNAQP50148 359 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 NEK4P51957 841 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 STAT2P52630 851 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 RAB15P59190 212 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 TRAF1Q13077 416 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 COG2Q14746 738 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 SEC23AQ15436 765 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 CCDC96Q2M329 555 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 CRTC2Q53ET0 693 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 ASPRV1Q53RT3 343 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 TMEM164Q5U3C3 297 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 CHST3Q7LGC8 479 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 CCDC84Q86UT8 332 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 FAM160B2Q86V87 743 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 ANKMY2Q8IV38 441 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 MB21D1Q8N884 522 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 ACER1Q8TDN7 264 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 IGDCC4Q8TDY8 1250 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 LZTS2Q9BRK4 669 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 ALDH8A1Q9H2A2 487 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 RPAP3Q9H6T3 665 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 ZFYVE28Q9HCC9 887 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 SAGE1Q9NXZ1 904 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 FEM1BQ9UK73 627 aa9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 NAP1L2Q9ULW6 460 aaPredicted RBP9.6□□□□□ -0.87
AC004009.3-201ENST00000624160 PDHXO00330 501 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 ZBTB43O43298 467 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 FLOT1O75955 427 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 NDUFB10O96000 172 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 GCLCP48506 637 aaPredicted RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 WNT7BP56706 349 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 ANTXR2P58335 489 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 HTRA3P83110 453 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 USP4Q13107 963 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 PTK7Q13308 1070 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 TAF1CQ15572 869 aaPredicted RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 SHROOM1Q2M3G4 852 aaPredicted RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 CPLX2Q6PUV4 134 aaKnown RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 Q6ZUG5 572 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 CLEC10AQ8IUN9 316 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 SIAH1Q8IUQ4 282 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 TRMT44Q8IYL2 757 aaKnown RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 SPICE1Q8N0Z3 855 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 PRPF38AQ8NAV1 312 aaKnown RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 NUP133Q8WUM0 1156 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 BRI3BPQ8WY22 251 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 LY9Q9HBG7 655 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 RBM28Q9NW13 759 aaKnown RBP9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 TACC3Q9Y6A5 838 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 TAF6LQ9Y6J9 622 aa9.59□□□□□ -0.87
AC004009.3-201ENST00000624160 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 BTBD19C9JJ37 291 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 PLA2G6O60733 806 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 AOC2O75106 756 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 PDHBP11177 359 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 ARHGEF6Q15052 776 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 CCAR1Q8IX12 1150 aaKnown RBP9.58□□□□□ -0.88
AC004009.3-201ENST00000624160 BRF1Q92994 677 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms