RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 AMPD3Q01432 767 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 SPA17Q15506 151 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 CCNI2Q6ZMN8 369 aaPredicted RBP19.49■□□□□ 0.71
DDX1-207ENST00000617198 BICDL1Q6ZP65 573 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 KRT25Q7Z3Z0 450 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
DDX1-207ENST00000617198 ZMYND12Q9H0C1 365 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 JAG2Q9Y219 1238 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 CCNT1O60563 726 aaKnown RBP19.49■□□□□ 0.71
DDX1-207ENST00000617198 ZMYND10O75800 440 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 COBLL1Q53SF7 1204 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 CNNM4Q6P4Q7 775 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 LRRC31Q6UY01 552 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 C10orf67Q8IYJ2 551 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 MARCH10Q8NA82 808 aaPredicted RBP19.49■□□□□ 0.71
DDX1-207ENST00000617198 LZTS2Q9BRK4 669 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 MTMR7Q9Y216 660 aa19.49■□□□□ 0.71
DDX1-207ENST00000617198 ZNF263O14978 683 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 TRIM66O15016 1216 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 LETM2Q2VYF4 491 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 TRIM58Q8NG06 486 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 CRACR2AQ9BSW2 395 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 SELENOOQ9BVL4 669 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 LRWD1Q9UFC0 647 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 JRKLQ9Y4A0 524 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
DDX1-207ENST00000617198 USO1O60763 962 aaKnown RBP19.48■□□□□ 0.71
DDX1-207ENST00000617198 HNRNPH3P31942 346 aaKnown RBP19.48■□□□□ 0.71
DDX1-207ENST00000617198 NONOQ15233 471 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX1-207ENST00000617198 CCDC70Q6NSX1 233 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 FOXR1Q6PIV2 292 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 ZNF444Q8N0Y2 327 aaPredicted RBP19.48■□□□□ 0.71
DDX1-207ENST00000617198 TMEM47Q9BQJ4 181 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 SNX12Q9UMY4 172 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 STX8Q9UNK0 236 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 PLAGL2Q9UPG8 496 aa19.48■□□□□ 0.71
DDX1-207ENST00000617198 MYBL2P10244 700 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 NAPAP54920 295 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 C2orf54Q08AI8 447 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 CCDC96Q2M329 555 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 AMOTL1Q8IY63 956 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 KIAA0895Q8NCT3 520 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
DDX1-207ENST00000617198 GDAP1L1Q96MZ0 367 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 NLRP3Q96P20 1036 aa19.47■□□□□ 0.71
DDX1-207ENST00000617198 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 TACC1O75410 805 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 TECP42680 631 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 TBC1D9BQ66K14 1250 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 TXNRD3Q86VQ6 643 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 GSPT2Q8IYD1 628 aaKnown RBP19.46■□□□□ 0.71
DDX1-207ENST00000617198 SH3RF3Q8TEJ3 882 aaPredicted RBP19.46■□□□□ 0.71
DDX1-207ENST00000617198 SPZ1Q9BXG8 430 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 IFIH1Q9BYX4 1025 aaKnown RBP19.46■□□□□ 0.71
DDX1-207ENST00000617198 PLEKP08567 350 aaPredicted RBP19.46■□□□□ 0.71
DDX1-207ENST00000617198 GOLGA8HP0CJ92 632 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 GGCXP38435 758 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 CENPPQ6IPU0 288 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 NEK8Q86SG6 692 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 CREG2Q8IUH2 290 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 MMGT1Q8N4V1 131 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 TRIM34Q9BYJ4 488 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 THRAP3Q9Y2W1 955 aaKnown RBP19.46■□□□□ 0.71
DDX1-207ENST00000617198 SPATA31A1Q5TZJ5 1347 aa19.46■□□□□ 0.71
DDX1-207ENST00000617198 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.74e-6■□□□□ 9.9
DDX1-207ENST00000617198 ITIH3Q06033 890 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 VWA3BQ502W6 1294 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 ZNF572Q7Z3I7 529 aaPredicted RBP19.45■□□□□ 0.7
DDX1-207ENST00000617198 RIN2Q8WYP3 895 aaPredicted RBP19.45■□□□□ 0.7
DDX1-207ENST00000617198 CALML4Q96GE6 196 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 MMTAG2Q9BU76 263 aaKnown RBP19.45■□□□□ 0.7
DDX1-207ENST00000617198 SH2D4AQ9H788 454 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 ARHGAP20Q9P2F6 1191 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 PCDHA13Q9Y5I0 950 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 SMCO2A6NFE2 343 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 LDHBP07195 334 aaKnown RBP19.45■□□□□ 0.7
DDX1-207ENST00000617198 PRLRP16471 622 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 GNA11P29992 359 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 C2CD5Q86YS7 1000 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 SLC44A5Q8NCS7 719 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 SMCR8Q8TEV9 937 aaPredicted RBP19.45■□□□□ 0.7
DDX1-207ENST00000617198 HPS3Q969F9 1004 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 SLC39A2Q9NP94 309 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 FAM184BQ9ULE4 1060 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 SIK3Q9Y2K2 1263 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 CAPN6Q9Y6Q1 641 aa19.45■□□□□ 0.7
DDX1-207ENST00000617198 AGPSO00116 658 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 AENQ8WTP8 325 aaKnown RBP19.44■□□□□ 0.7
DDX1-207ENST00000617198 RUBCNQ92622 972 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 ZFP91Q96JP5 570 aaPredicted RBP19.44■□□□□ 0.7
DDX1-207ENST00000617198 NDST4Q9H3R1 872 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 LCA5LO95447 670 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 KIF11P52732 1056 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 LINC00116Q8NCU8 138 aa19.44■□□□□ 0.7
DDX1-207ENST00000617198 IRS2Q9Y4H2 1338 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms