RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TLK2Q86UE8 772 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 ASTN1O14525 1302 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 TNKSO95271 1327 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
TARDBP-218ENST00000617172 CTAGE5O15320 804 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 TIMP1P01033 207 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 PDE4DQ08499 809 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 TRAF1Q13077 416 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 SHHQ15465 462 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 BRDTQ58F21 947 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-218ENST00000617172 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 WDR11Q9BZH6 1224 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 ABCB11O95342 1321 aa11.3□□□□□ -0.6
TARDBP-218ENST00000617172 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 ERICH2A1L162 156 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 DHX16O60231 1041 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 ITGB8P26012 769 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 CPT1AP50416 773 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 BEX3Q00994 111 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 FPGSQ05932 587 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 SART3Q15020 963 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 USH1GQ495M9 461 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 FBXO16Q8IX29 292 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 NSUN6Q8TEA1 469 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 SCFD2Q8WU76 684 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
TARDBP-218ENST00000617172 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
TARDBP-218ENST00000617172 SGSM2O43147 1006 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 KPNA6O60684 536 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 EDNRBP24530 442 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-218ENST00000617172 PPIGQ13427 754 aaKnown RBP eCLIP11.28□□□□□ -0.66e-7■□□□□ 8.8
TARDBP-218ENST00000617172 SEC23AQ15436 765 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 MFSD5Q6N075 450 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 SLC30A10Q6XR72 485 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
TARDBP-218ENST00000617172 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 IWS1Q96ST2 819 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 IL25Q9H293 177 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-218ENST00000617172 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
TARDBP-218ENST00000617172 STXBP5LQ9Y2K9 1186 aa11.28□□□□□ -0.6
TARDBP-218ENST00000617172 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
TARDBP-218ENST00000617172 CD4P01730 458 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 CYP21A2P08686 494 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 PTH1RQ03431 593 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 TTLL4Q14679 1199 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 PPP2R5BQ15173 497 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 MAP4K1Q92918 833 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
TARDBP-218ENST00000617172 AMNQ9BXJ7 453 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 CPVLQ9H3G5 476 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 VAT1LQ9HCJ6 419 aa11.27□□□□□ -0.61
TARDBP-218ENST00000617172 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
TARDBP-218ENST00000617172 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-218ENST00000617172 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-218ENST00000617172 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-218ENST00000617172 E7EWF7 191 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 ZBTB5O15062 677 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 TXNP10599 105 aaKnown RBP11.26□□□□□ -0.61
TARDBP-218ENST00000617172 STXBP2Q15833 593 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 Q7L0L9 218 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 SYTL5Q8TDW5 730 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-218ENST00000617172 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
TARDBP-218ENST00000617172 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
TARDBP-218ENST00000617172 A6NJR5 290 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 PURAQ00577 322 aaKnown RBP11.25□□□□□ -0.61
TARDBP-218ENST00000617172 WTAPQ15007 396 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 STAG2Q8N3U4 1231 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 SLC17A8Q8NDX2 589 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms