RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PTPN18Q99952 460 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 RTEL1Q9NZ71 1219 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 BTBD7Q9P203 1132 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 CNPY2Q9Y2B0 182 aa21.21■□□□□ 0.99
SSBP4-212ENST00000601919 FIBPO43427 364 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 CYP2C8P10632 490 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 TAL1P17542 331 aaPredicted RBP21.2■□□□□ 0.98
SSBP4-212ENST00000601919 HSD17B4P51659 736 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 CCNA1P78396 465 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 GHRHRQ02643 423 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 NOGQ13253 232 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 ANO1Q5XXA6 986 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 SPATA32Q96LK8 384 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 NAP1L4Q99733 375 aaKnown RBP21.2■□□□□ 0.98
SSBP4-212ENST00000601919 TMEM260Q9NX78 707 aa21.2■□□□□ 0.98
SSBP4-212ENST00000601919 TFIP11Q9UBB9 837 aaKnown RBP21.2■□□□□ 0.98
SSBP4-212ENST00000601919 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 YEATS4O95619 227 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 MCM4P33991 863 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 INF2Q27J81 1249 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 EARS2Q5JPH6 523 aaKnown RBP21.19■□□□□ 0.98
SSBP4-212ENST00000601919 TTC38Q5R3I4 469 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 IFNL1Q8IU54 200 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 GPRC5AQ8NFJ5 357 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 USP28Q96RU2 1077 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 ANO3Q9BYT9 981 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
SSBP4-212ENST00000601919 NFIBO00712 420 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 CNMDO75829 334 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 HOXA13P31271 388 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-212ENST00000601919 TM4SF4P48230 202 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-212ENST00000601919 TOB1P50616 345 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-212ENST00000601919 ERVK-9P63128 1117 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 ERVK-24P63145 666 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 ORC2Q13416 577 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-212ENST00000601919 STK38Q15208 465 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 MUM1L1Q5H9M0 696 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 CYP4F22Q6NT55 531 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 RNF207Q6ZRF8 634 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 KCNG4Q8TDN1 519 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 TBCKQ8TEA7 893 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 MROH8Q9H579 483 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 RIPK3Q9Y572 518 aa21.18■□□□□ 0.98
SSBP4-212ENST00000601919 FAM205CA6NFA0 338 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 ATP2B1P20020 1258 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 USP11P51784 963 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 CEBPZQ03701 1054 aaKnown RBP21.17■□□□□ 0.98
SSBP4-212ENST00000601919 GRM1Q13255 1194 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 SF3A1Q15459 793 aaKnown RBP21.17■□□□□ 0.98
SSBP4-212ENST00000601919 NSMFQ6X4W1 530 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 FCHSD1Q86WN1 690 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 NCAPG2Q86XI2 1143 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 TMEM87AQ8NBN3 555 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 CAPNS2Q96L46 248 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 MOV10L1Q9BXT6 1211 aaKnown RBP21.17■□□□□ 0.98
SSBP4-212ENST00000601919 RCOR1Q9UKL0 485 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 PFASO15067 1338 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 ELP1O95163 1332 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
SSBP4-212ENST00000601919 IGF2BP3O00425 579 aaKnown RBP eCLIP21.16■□□□□ 0.98
SSBP4-212ENST00000601919 ALDH1A1P00352 501 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 TAF1CQ15572 869 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-212ENST00000601919 NOM1Q5C9Z4 860 aaKnown RBP21.16■□□□□ 0.98
SSBP4-212ENST00000601919 POTEEQ6S8J3 1075 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 CCAR1Q8IX12 1150 aaKnown RBP21.16■□□□□ 0.98
SSBP4-212ENST00000601919 LEO1Q8WVC0 666 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-212ENST00000601919 CHAMP1Q96JM3 812 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 TXNRD2Q9NNW7 524 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 MORF4L1Q9UBU8 362 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 CLIC4Q9Y696 253 aa21.16■□□□□ 0.98
SSBP4-212ENST00000601919 GCFC2P16383 781 aaKnown RBP21.15■□□□□ 0.98
SSBP4-212ENST00000601919 SREBF1P36956 1147 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
SSBP4-212ENST00000601919 SLC39A14Q15043 492 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 NFKBIBQ15653 356 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.15■□□□□ 0.98
SSBP4-212ENST00000601919 ANKRD13CQ8N6S4 541 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 LINC00301Q8NCQ3 95 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 TBC1D5Q92609 795 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 ZFYVE28Q9HCC9 887 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.15■□□□□ 0.98
SSBP4-212ENST00000601919 PCDHB6Q9Y5E3 794 aa21.15■□□□□ 0.98
SSBP4-212ENST00000601919 SPTLC2O15270 562 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 ERCC3P19447 782 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 BAATQ14032 418 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-212ENST00000601919 FAM110CQ1W6H9 321 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 LETM2Q2VYF4 491 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 ANKRD35Q8N283 1001 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 SYTL5Q8TDW5 730 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-212ENST00000601919 PGBD1Q96JS3 809 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 FTOQ9C0B1 505 aaKnown RBP eCLIP21.14■□□□□ 0.97
SSBP4-212ENST00000601919 GDPD2Q9HCC8 539 aa21.14■□□□□ 0.97
SSBP4-212ENST00000601919 MORC2Q9Y6X9 1032 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-212ENST00000601919 GOLGA6L4A6NEF3 574 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 LAD1O00515 517 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 CCNT1O60563 726 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1186.9 ms