RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ADD3Q9UEY8 706 aaKnown RBP17.78■□□□□ 0.44
TGFB1-202ENST00000597453 A0A0C4DFX4 3053 aa17.78■□□□□ 0.44
TGFB1-202ENST00000597453 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 B4E1Z4 1266 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 HIP1O00291 1037 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 CD4P01730 458 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 RNF207Q6ZRF8 634 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 SLC43A3Q8NBI5 491 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 PNMA1Q8ND90 353 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.77■□□□□ 0.445e-6■■■■□ 20.1
TGFB1-202ENST00000597453 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 SEMA6BQ9H3T3 888 aa17.77■□□□□ 0.44
TGFB1-202ENST00000597453 TLR3O15455 904 aaKnown RBP17.76■□□□□ 0.43
TGFB1-202ENST00000597453 RPS6P62753 249 aaKnown RBP17.76■□□□□ 0.43
TGFB1-202ENST00000597453 USH1GQ495M9 461 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 DUSP28Q4G0W2 176 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 GPATCH4Q5T3I0 446 aaKnown RBP17.76■□□□□ 0.43
TGFB1-202ENST00000597453 C16orf59Q7L2K0 433 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 ANKS1AQ92625 1134 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 ZSCAN10Q96SZ4 725 aaPredicted RBP17.76■□□□□ 0.43
TGFB1-202ENST00000597453 CDX2Q99626 313 aaPredicted RBP17.76■□□□□ 0.43
TGFB1-202ENST00000597453 Q9Y3F1 56 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 EYSQ5T1H1 3165 aa17.76■□□□□ 0.43
TGFB1-202ENST00000597453 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
TGFB1-202ENST00000597453 CABYRO75952 493 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
TGFB1-202ENST00000597453 CSF2RAP15509 400 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 NT5C2P49902 561 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 PSMC6P62333 389 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
TGFB1-202ENST00000597453 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 ENAHQ8N8S7 591 aaPredicted RBP17.75■□□□□ 0.43
TGFB1-202ENST00000597453 WDR11Q9BZH6 1224 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 KAT14Q9H8E8 782 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 ZSWIM5Q9P217 1185 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
TGFB1-202ENST00000597453 TNKSO95271 1327 aa17.74■□□□□ 0.43
TGFB1-202ENST00000597453 ZEB2O60315 1214 aa17.74■□□□□ 0.43
TGFB1-202ENST00000597453 EDNRBP24530 442 aa17.74■□□□□ 0.43
TGFB1-202ENST00000597453 CYP2C18P33260 490 aa17.74■□□□□ 0.43
TGFB1-202ENST00000597453 PPIGQ13427 754 aaKnown RBP eCLIP17.74■□□□□ 0.435e-7■□□□□ 9.2
TGFB1-202ENST00000597453 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
TGFB1-202ENST00000597453 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
TGFB1-202ENST00000597453 UMODL1Q5DID0 1318 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 DLL1O00548 723 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 ACRP10323 421 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 ADGRF4Q8IZF3 695 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 TRPV6Q9H1D0 765 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 SCN10AQ9Y5Y9 1956 aa17.73■□□□□ 0.43
TGFB1-202ENST00000597453 B4GALT4O60513 344 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 PDE4DQ08499 809 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 RASIP1Q5U651 963 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 DNERQ8NFT8 737 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 MYLIPQ8WY64 445 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 TBC1D5Q92609 795 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 KIAA1217Q5T5P2 1943 aa17.72■□□□□ 0.43
TGFB1-202ENST00000597453 GBF1Q92538 1859 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.71■□□□□ 0.43
TGFB1-202ENST00000597453 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.71■□□□□ 0.43
TGFB1-202ENST00000597453 PURAQ00577 322 aaKnown RBP17.71■□□□□ 0.43
TGFB1-202ENST00000597453 QRICH1Q2TAL8 776 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 ZNF365Q70YC5 407 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 RGS22Q8NE09 1264 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 COPS5Q92905 334 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 KRT23Q9C075 422 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
TGFB1-202ENST00000597453 ABCB11O95342 1321 aa17.71■□□□□ 0.42
TGFB1-202ENST00000597453 GRXCR1A8MXD5 290 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 MYL3P08590 195 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 DNAJB2P25686 324 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 CPT1AP50416 773 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 PSRC1Q6PGN9 363 aaPredicted RBP17.7■□□□□ 0.42
TGFB1-202ENST00000597453 CYB5R4Q7L1T6 521 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 NOC4LQ9BVI4 516 aaKnown RBP17.7■□□□□ 0.42
TGFB1-202ENST00000597453 SEZ6LQ9BYH1 1024 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
TGFB1-202ENST00000597453 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 IL23AQ9NPF7 189 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 COL20A1Q9P218 1284 aa17.7■□□□□ 0.42
TGFB1-202ENST00000597453 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 VCANP13611 3396 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 TMEM265A0A087WTH1 108 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 ARIH2O95376 493 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms