RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 C7orf25Q9BPX7 421 aa25.46■■□□□ 1.67
SRRM1-222ENST00000596378 MAGEF1Q9HAY2 307 aa25.46■■□□□ 1.67
SRRM1-222ENST00000596378 LRWD1Q9UFC0 647 aa25.46■■□□□ 1.67
SRRM1-222ENST00000596378 PNMA6FA0A0J9YX94 578 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 HLA-DOAP06340 250 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 PDE6BP35913 854 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 ARHGAP29Q52LW3 1261 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 CALML4Q96GE6 196 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 MASTLQ96GX5 879 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 KRT9P35527 623 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 CCDC51Q96ER9 411 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 THAP9Q9H5L6 903 aa25.45■■□□□ 1.66
SRRM1-222ENST00000596378 ABL1P00519 1130 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 FECHP22830 423 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 CSGALNACT2Q8N6G5 542 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 MB21D1Q8N884 522 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 PNMA5Q96PV4 448 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 NUDT12Q9BQG2 462 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 BLOC1S4Q9NUP1 217 aa25.44■■□□□ 1.66
SRRM1-222ENST00000596378 GREB1LQ9C091 1923 aaPredicted RBP25.44■■□□□ 1.66
SRRM1-222ENST00000596378 LGALS16A8MUM7 142 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 TADA3O75528 432 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 MCM6Q14566 821 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 ANKRD40Q6AI12 368 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 UIMC1Q96RL1 719 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 FEZ1Q99689 392 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 TMX4Q9H1E5 349 aaPredicted RBP25.43■■□□□ 1.66
SRRM1-222ENST00000596378 RIC8AQ9NPQ8 531 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 APBA3O96018 575 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 EEF1GP26641 437 aaKnown RBP25.43■■□□□ 1.66
SRRM1-222ENST00000596378 MAP3K9P80192 1104 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 P2RX5Q93086 422 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 DDX41Q9UJV9 622 aaKnown RBP25.43■■□□□ 1.66
SRRM1-222ENST00000596378 MRFAP1Q9Y605 127 aa25.43■■□□□ 1.66
SRRM1-222ENST00000596378 MYO3BQ8WXR4 1341 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 SIPA1L1O43166 1804 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 B4DLN1 442 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 NKRFO15226 690 aaKnown RBP eCLIP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 KIAA0895Q8NCT3 520 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 ZNF507Q8TCN5 953 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 UBXN4Q92575 508 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 DHTKD1Q96HY7 919 aaPredicted RBP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 SLC39A2Q9NP94 309 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 SCN9AQ15858 1988 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 MYH7BA7E2Y1 1941 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 TTC26A0AVF1 554 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 DDTLA6NHG4 134 aaPredicted RBP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 PRKCSHP14314 528 aaPredicted RBP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 RBM5P52756 815 aaKnown RBP eCLIP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 CHP1Q99653 195 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 EPC1Q9H2F5 836 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 ZNF446Q9NWS9 450 aa25.42■■□□□ 1.66
SRRM1-222ENST00000596378 MAGEC2Q9UBF1 373 aaPredicted RBP25.42■■□□□ 1.66
SRRM1-222ENST00000596378 MYMKA6NI61 221 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 H2AFXP16104 143 aaPredicted RBP25.41■■□□□ 1.66
SRRM1-222ENST00000596378 FXR2P51116 673 aaKnown RBP eCLIP25.41■■□□□ 1.665e-6■■■□□ 14.9
SRRM1-222ENST00000596378 DYMQ7RTS9 669 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 TMTC1Q8IUR5 882 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 CCDC47Q96A33 483 aaKnown RBP25.41■■□□□ 1.66
SRRM1-222ENST00000596378 CCNE1P24864 410 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 TRIM14Q14142 442 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 SV2BQ7L1I2 683 aa25.41■■□□□ 1.66
SRRM1-222ENST00000596378 ZBTB5O15062 677 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 CLK2P49760 499 aaKnown RBP25.4■■□□□ 1.66
SRRM1-222ENST00000596378 AMPD3Q01432 767 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 TMEM266Q2M3C6 531 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 CYP26C1Q6V0L0 522 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 KCNK18Q7Z418 384 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 ZDHHC15Q96MV8 337 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 TUBGCP2Q9BSJ2 902 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 OGFRQ9NZT2 677 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 KLK7P49862 253 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 PPP2R3AQ06190 1150 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 GPATCH4Q5T3I0 446 aaKnown RBP25.4■■□□□ 1.66
SRRM1-222ENST00000596378 SNX29Q8TEQ0 813 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 CUL5Q93034 780 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 CDK5RAP3Q96JB5 506 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 SLF1Q9BQI6 1058 aa25.4■■□□□ 1.66
SRRM1-222ENST00000596378 PPP1R18Q6NYC8 613 aa25.39■■□□□ 1.66
SRRM1-222ENST00000596378 PODNQ7Z5L7 613 aa25.39■■□□□ 1.66
SRRM1-222ENST00000596378 LARP4BQ92615 738 aaKnown RBP25.39■■□□□ 1.66
SRRM1-222ENST00000596378 CNOT6LQ96LI5 555 aaKnown RBP25.39■■□□□ 1.66
SRRM1-222ENST00000596378 FAM198AQ9UFP1 575 aa25.39■■□□□ 1.66
SRRM1-222ENST00000596378 EEF2P13639 858 aaKnown RBP25.38■■□□□ 1.65
SRRM1-222ENST00000596378 CLCN6P51797 869 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 ZNF569Q5MCW4 686 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 SH3BP5LQ7L8J4 393 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 C2CD5Q86YS7 1000 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 ZSCAN29Q8IWY8 852 aaPredicted RBP25.38■■□□□ 1.65
SRRM1-222ENST00000596378 DDX25Q9UHL0 483 aaKnown RBP25.38■■□□□ 1.65
SRRM1-222ENST00000596378 EFCAB8A8MWE9 144 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 KIF5CO60282 957 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 SEMA3FQ13275 785 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 ECM1Q16610 540 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 HAS1Q92839 578 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 EHD4Q9H223 541 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 SEMA6BQ9H3T3 888 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 PSTPIP2Q9H939 334 aa25.38■■□□□ 1.65
SRRM1-222ENST00000596378 USP17L15C9J2P7 530 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 222.4 ms