RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-208ENST00000595726 COL4A4P53420 1690 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 ALAS1P13196 640 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 DEFB103AP81534 67 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 GPNMBQ14956 572 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
SHKBP1-208ENST00000595726 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 GRXCR2A6NFK2 248 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 PRDM1O75626 825 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 BMP3P12645 472 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 KCNJ6P48051 423 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 WDR5P61964 334 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 TCTN1Q2MV58 587 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 SLFN13Q68D06 897 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 MKL1Q969V6 931 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 CEP95Q96GE4 821 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 MTG1Q9BT17 334 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 CYP39A1Q9NYL5 469 aa16.4■□□□□ 0.22
SHKBP1-208ENST00000595726 H3BQ06 376 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 DCXO43602 365 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 MS4A1P11836 297 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 FAM117BQ6P1L5 589 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 VTA1Q9NP79 307 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 GPHNQ9NQX3 736 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 MTMR4Q9NYA4 1195 aa16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-208ENST00000595726 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 BAIAP3O94812 1187 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 ERVK-21P61565 698 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 UBE3CQ15386 1083 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 OR6J1Q8NGC5 347 aa16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 ARPP21Q9UBL0 812 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-208ENST00000595726 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 GSG1L2A8MUP6 293 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 CPT1AP50416 773 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 BFSP2Q13515 415 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 COPS5Q92905 334 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 RAD9AQ99638 391 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
SHKBP1-208ENST00000595726 TTLL1O95922 423 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 FDX1P10109 184 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 MCCP23508 829 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 STAT2P52630 851 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 NFRKBQ6P4R8 1299 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 RPAP2Q8IXW5 612 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 MORC4Q8TE76 937 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 ZFHX2Q9C0A1 2572 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-208ENST00000595726 GJB5O95377 273 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 EP400NLQ6ZTU2 488 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 CTAGE1Q96RT6 745 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 HAUS7Q99871 368 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 KCNH6Q9H252 994 aa16.35■□□□□ 0.21
SHKBP1-208ENST00000595726 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 ATP5JP18859 108 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 ZP2Q05996 745 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 PTGISQ16647 500 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 CRBNQ96SW2 442 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 ZNF318Q5VUA4 2279 aa16.34■□□□□ 0.21
SHKBP1-208ENST00000595726 NBNO60934 754 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 SLC1A4P43007 532 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 ALDH5A1P51649 535 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 GDF6Q6KF10 455 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 DHX38Q92620 1227 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms