RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SIP14410 1827 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 NKRFO15226 690 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMAD4-215ENST00000592911 EFCAB14O75071 495 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 TTLL1O95922 423 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 GNAT2P19087 354 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 RASA1P20936 1047 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 CPT1AP50416 773 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 STAT2P52630 851 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 SKIV2LQ15477 1246 aaKnown RBP10.38□□□□□ -0.75
SMAD4-215ENST00000592911 PUS10Q3MIT2 529 aaKnown RBP10.38□□□□□ -0.75
SMAD4-215ENST00000592911 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
SMAD4-215ENST00000592911 NFRKBQ6P4R8 1299 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 CTR9Q6PD62 1173 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 CXCL17Q6UXB2 119 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 HAUS7Q99871 368 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 MKNK2Q9HBH9 465 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 SLC4A4Q9Y6R1 1079 aa10.38□□□□□ -0.75
SMAD4-215ENST00000592911 GRIN2DO15399 1336 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 LCTP09848 1927 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 CA3P07451 260 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 MS4A1P11836 297 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 ALADP13716 330 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 KCNQ1P51787 676 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 TFF2Q03403 129 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 BFSP2Q13515 415 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 NOL8Q76FK4 1167 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 ITPRIPQ8IWB1 547 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 CPXCR1Q8N123 301 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 GMCL1Q96IK5 515 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 MPHOSPH6Q99547 160 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 CHMP4BQ9H444 224 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 A1CFQ9NQ94 594 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 ADD3Q9UEY8 706 aaKnown RBP10.37□□□□□ -0.75
SMAD4-215ENST00000592911 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
SMAD4-215ENST00000592911 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
SMAD4-215ENST00000592911 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 PRKAB2O43741 272 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 BMP3P12645 472 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 SMPD1P17405 629 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 RABGGTBP53611 331 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 CCL23P55773 120 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 TAP1Q03518 808 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 RCSD1Q6JBY9 416 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 NECAB3Q96P71 396 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-215ENST00000592911 RAVER2Q9HCJ3 691 aaKnown RBP10.36□□□□□ -0.75
SMAD4-215ENST00000592911 MTMR4Q9NYA4 1195 aa10.36□□□□□ -0.75
SMAD4-215ENST00000592911 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
SMAD4-215ENST00000592911 UMODL1Q5DID0 1318 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 B4DLN1 442 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 RAD21O60216 631 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 ZFYP08048 801 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 PURAQ00577 322 aaKnown RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 BEX3Q00994 111 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 RBL2Q08999 1139 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 TTLL4Q14679 1199 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 RETREG2Q8NC44 543 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 MTG1Q9BT17 334 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-215ENST00000592911 TRPV6Q9H1D0 765 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 C11orf16Q9NQ32 467 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 RNF146Q9NTX7 359 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
SMAD4-215ENST00000592911 MICAL3Q7RTP6 2002 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 SMIM22K7EJ46 135 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 SLC3A2P08195 630 aaKnown RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 SESTD1Q86VW0 696 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 AFAP1L1Q8TED9 768 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 STRBPQ96SI9 672 aaKnown RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-215ENST00000592911 CYP39A1Q9NYL5 469 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 CTNNA3Q9UI47 895 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 FAM50BQ9Y247 325 aa10.34□□□□□ -0.75
SMAD4-215ENST00000592911 ZNF536O15090 1300 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms