RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 ZMYND12Q9H0C1 365 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 ZBTB21Q9ULJ3 1066 aa10.74□□□□□ -0.69
VPS25-205ENST00000590339 SRPRBQ9Y5M8 271 aaKnown RBP10.74□□□□□ -0.69
VPS25-205ENST00000590339 USP17L10C9JJH3 530 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 MPHOSPH10O00566 681 aaKnown RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 ZNF202O95125 648 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 BCRP11274 1271 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 FCGRTP55899 365 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 BACE1P56817 501 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 ELOA2Q8IYF1 753 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 CLIC6Q96NY7 704 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 PIGSQ96S52 555 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 WDR18Q9BV38 432 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 TMEM106CQ9BVX2 250 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 ASCC2Q9H1I8 757 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 CPVLQ9H3G5 476 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 KANSL2Q9H9L4 492 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 BIN2Q9UBW5 565 aaPredicted RBP10.73□□□□□ -0.69
VPS25-205ENST00000590339 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 SRRDQ9UH36 339 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 PNMA3Q9UL41 463 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 SLC45A1Q9Y2W3 748 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 ADGRA2Q96PE1 1338 aa10.73□□□□□ -0.69
VPS25-205ENST00000590339 DOCK1Q14185 1865 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 C19orf81C9J6K1 198 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 TNPO2O14787 897 aaKnown RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 PEX10O60683 326 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 CAVIN2O95810 425 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 GNRH1P01148 92 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 EEF2P13639 858 aaKnown RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 SYKP43405 635 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 IRX3P78415 501 aaPredicted RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 ICA1Q05084 483 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 PRKCZQ05513 592 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 GRIN1Q05586 938 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS25-205ENST00000590339 SEPT2Q15019 361 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 STX1AQ16623 288 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 ABCB5Q2M3G0 1257 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 SH3D19Q5HYK7 790 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 SASS6Q6UVJ0 657 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 PIK3AP1Q6ZUJ8 805 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 HEATR3Q7Z4Q2 680 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 SIAH1Q8IUQ4 282 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 FERMT2Q96AC1 680 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 ARMC5Q96C12 935 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 P2RX7Q99572 595 aaKnown RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 FEZ1Q99689 392 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 SEC63Q9UGP8 760 aaKnown RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 PCDHA6Q9UN73 950 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 GABRQQ9UN88 632 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 PCDHA8Q9Y5H6 950 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 FRMPD2Q68DX3 1309 aaPredicted RBP10.72□□□□□ -0.69
VPS25-205ENST00000590339 MYPNQ86TC9 1320 aa10.72□□□□□ -0.69
VPS25-205ENST00000590339 NAPAP54920 295 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 PRMT2P55345 433 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 RASGRP4Q8TDF6 673 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 ACER1Q8TDN7 264 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.69
VPS25-205ENST00000590339 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 ZNF333Q96JL9 665 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 UBA5Q9GZZ9 404 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 CBX8Q9HC52 389 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 GINM1Q9NU53 330 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 TUBE1Q9UJT0 475 aa10.71□□□□□ -0.69
VPS25-205ENST00000590339 CCDC194A0A1B0GVG4 234 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 PPP1R11O60927 126 aaPredicted RBP10.7□□□□□ -0.7
VPS25-205ENST00000590339 GRK4P32298 578 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 FLT3LGP49771 235 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 ORC2Q13416 577 aaPredicted RBP10.7□□□□□ -0.7
VPS25-205ENST00000590339 MTFR1Q15390 333 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
VPS25-205ENST00000590339 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 C11orf57Q6ZUT1 292 aaPredicted RBP10.7□□□□□ -0.7
VPS25-205ENST00000590339 HOMER1Q86YM7 354 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 C4orf32Q8N8J7 132 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 C6orf50Q9HD87 102 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 ANO10Q9NW15 660 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 KCNH3Q9ULD8 1083 aa10.7□□□□□ -0.7
VPS25-205ENST00000590339 MYH7BA7E2Y1 1941 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 PNMA6FA0A0J9YX94 578 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 ZBTB5O15062 677 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms