RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
GGA3-219ENST00000584550 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 ZBED2Q9BTP6 218 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 PTPRSQ13332 1948 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 GREB1LQ9C091 1923 aaPredicted RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 PRDM1O75626 825 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 ALAS1P13196 640 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 OAZ1P54368 228 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.14□□□□□ -0.47
GGA3-219ENST00000584550 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 FBXL18Q96ME1 805 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.14□□□□□ -0.473e-10■■■■□ 23.1
GGA3-219ENST00000584550 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 UBE2ZQ9H832 354 aaPredicted RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
GGA3-219ENST00000584550 Q9Y3F1 56 aa12.14□□□□□ -0.47
GGA3-219ENST00000584550 BMP3P12645 472 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 ALADP13716 330 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 RFC2P35250 354 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 KCNJ6P48051 423 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
GGA3-219ENST00000584550 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 SLFN13Q68D06 897 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
GGA3-219ENST00000584550 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
GGA3-219ENST00000584550 TET1Q8NFU7 2136 aa12.13□□□□□ -0.47
GGA3-219ENST00000584550 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 ZNF536O15090 1300 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
GGA3-219ENST00000584550 LEXMQ3ZCV2 418 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
GGA3-219ENST00000584550 OR6J1Q8NGC5 347 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 MTG1Q9BT17 334 aaPredicted RBP12.12□□□□□ -0.47
GGA3-219ENST00000584550 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 LMCD1Q9NZU5 365 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
GGA3-219ENST00000584550 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
GGA3-219ENST00000584550 TRIP12Q14669 1992 aaPredicted RBP12.12□□□□□ -0.47
GGA3-219ENST00000584550 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 CPT1AP50416 773 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 STAT2P52630 851 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
GGA3-219ENST00000584550 DEFB103AP81534 67 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 AAMPQ13685 434 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 FAM117BQ6P1L5 589 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 MKL1Q969V6 931 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
GGA3-219ENST00000584550 VTA1Q9NP79 307 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 CYP39A1Q9NYL5 469 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 C5orf42Q9H799 3197 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 USP34Q70CQ2 3546 aa12.11□□□□□ -0.47
GGA3-219ENST00000584550 TANC1Q9C0D5 1861 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 MYH7P12883 1935 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 H3BQ06 376 aaPredicted RBP12.1□□□□□ -0.47
GGA3-219ENST00000584550 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 BAIAP3O94812 1187 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 TTLL1O95922 423 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 MCCP23508 829 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 BFSP2Q13515 415 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
GGA3-219ENST00000584550 SBK1Q52WX2 424 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
GGA3-219ENST00000584550 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
GGA3-219ENST00000584550 TRIOO75962 3097 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 LCTP09848 1927 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 DCXO43602 365 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 IGHDP01880 384 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 FDX1P10109 184 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 SLC1A4P43007 532 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
GGA3-219ENST00000584550 GPNMBQ14956 572 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 PTGISQ16647 500 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 COPS5Q92905 334 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms