RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
IFT20-206ENST00000578122 CYP39A1Q9NYL5 469 aa17.81■□□□□ 0.44
IFT20-206ENST00000578122 MCM3APO60318 1980 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 LCTP09848 1927 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 CNTN2Q02246 1040 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 TRIM32Q13049 653 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 BAATQ14032 418 aaPredicted RBP17.8■□□□□ 0.44
IFT20-206ENST00000578122 RNF207Q6ZRF8 634 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 MCF2L2Q86YR7 1114 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 FAM133AQ8N9E0 248 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 RGS22Q8NE09 1264 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 MS4A3Q96HJ5 214 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 TBC1D32Q96NH3 1257 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 NCOA5Q9HCD5 579 aaKnown RBP17.8■□□□□ 0.44
IFT20-206ENST00000578122 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
IFT20-206ENST00000578122 V9GY48 417 aaPredicted RBP17.8■□□□□ 0.44
IFT20-206ENST00000578122 MYCP01106 439 aaPredicted RBP17.79■□□□□ 0.44
IFT20-206ENST00000578122 STK3Q13188 491 aa17.79■□□□□ 0.44
IFT20-206ENST00000578122 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
IFT20-206ENST00000578122 MAF1Q9H063 256 aa17.79■□□□□ 0.44
IFT20-206ENST00000578122 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
IFT20-206ENST00000578122 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 CCDC85CA6NKD9 419 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 IGHA2P01877 340 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 CALML3P27482 149 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 CYP2C19P33261 490 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
IFT20-206ENST00000578122 RABEP1Q15276 862 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 MTFR1Q15390 333 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 SLC30A10Q6XR72 485 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 ZNF467Q7Z7K2 595 aaPredicted RBP17.78■□□□□ 0.44
IFT20-206ENST00000578122 TBC1D5Q92609 795 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 FGD4Q96M96 766 aa17.78■□□□□ 0.44
IFT20-206ENST00000578122 OPLAHO14841 1288 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 PFKFB2O60825 505 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 CCL5P13501 91 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 IFNAR1P17181 557 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 CACNB2Q08289 660 aaPredicted RBP17.77■□□□□ 0.44
IFT20-206ENST00000578122 NTRK3Q16288 839 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 HEATR3Q7Z4Q2 680 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.44
IFT20-206ENST00000578122 TINF2Q9BSI4 451 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
IFT20-206ENST00000578122 CPLX1O14810 134 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 CFBP00751 764 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 AKAP17AQ02040 695 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 MAMDC4Q6UXC1 1216 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 PHKBQ93100 1093 aa17.76■□□□□ 0.43
IFT20-206ENST00000578122 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 HMX1Q9NP08 348 aaPredicted RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 ADD3Q9UEY8 706 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
IFT20-206ENST00000578122 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 SYNGAP1Q96PV0 1343 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 ASB14A6NK59 587 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 HSD17B4P51659 736 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 SCRN1Q12765 414 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 ME3Q16798 604 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 WWC2Q6AWC2 1192 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
IFT20-206ENST00000578122 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
IFT20-206ENST00000578122 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
IFT20-206ENST00000578122 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 LIMCH1Q9UPQ0 1083 aa17.75■□□□□ 0.43
IFT20-206ENST00000578122 ASTN1O14525 1302 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
IFT20-206ENST00000578122 PPFIA3O75145 1194 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 LARGE1O95461 756 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 SCG2P13521 617 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 GHRHRQ02643 423 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 SSRP1Q08945 709 aaKnown RBP17.74■□□□□ 0.43
IFT20-206ENST00000578122 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
IFT20-206ENST00000578122 PRAMEF19Q5SWL8 479 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 TRPV1Q8NER1 839 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
IFT20-206ENST00000578122 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
IFT20-206ENST00000578122 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
IFT20-206ENST00000578122 MAP3K20Q9NYL2 800 aaKnown RBP17.74■□□□□ 0.43
IFT20-206ENST00000578122 hCG_1984214I3L0E3 225 aa17.73■□□□□ 0.43
IFT20-206ENST00000578122 SNAI1O95863 264 aaPredicted RBP17.73■□□□□ 0.43
IFT20-206ENST00000578122 CYBAP13498 195 aa17.73■□□□□ 0.43
IFT20-206ENST00000578122 CCND3P30281 292 aaPredicted RBP17.73■□□□□ 0.43
IFT20-206ENST00000578122 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
IFT20-206ENST00000578122 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
IFT20-206ENST00000578122 ARMCX2Q7L311 632 aa17.73■□□□□ 0.43
IFT20-206ENST00000578122 ZNF713Q8N859 430 aaPredicted RBP17.73■□□□□ 0.43
IFT20-206ENST00000578122 DNERQ8NFT8 737 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms