RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
CALCOCO2-228ENST00000576582 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
CALCOCO2-228ENST00000576582 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
CALCOCO2-228ENST00000576582 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
CALCOCO2-228ENST00000576582 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-228ENST00000576582 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 MYOGP15173 224 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 MCCP23508 829 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 RFC2P35250 354 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 PSMC6P62333 389 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 NBR1Q14596 966 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 SKIV2LQ15477 1246 aaKnown RBP12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 MICALL1Q8N3F8 863 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 SCLYQ96I15 445 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 MTCH2Q9Y6C9 303 aa12.68□□□□□ -0.38
CALCOCO2-228ENST00000576582 TNKSO95271 1327 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 CPT1AP50416 773 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 TFF2Q03403 129 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 NECAB3Q96P71 396 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 WDR11Q9BZH6 1224 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
CALCOCO2-228ENST00000576582 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 KPNA6O60684 536 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 ICAM1P05362 532 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 CA3P07451 260 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 CYP2C9P11712 490 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 KCNQ1P51787 676 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 PURAQ00577 322 aaKnown RBP12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 MUM1L1Q5H9M0 696 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
CALCOCO2-228ENST00000576582 M0R2C6 588 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 PTPN11Q06124 597 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 PPARAQ07869 468 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 C20orf194Q5TEA3 1177 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 KCTD1Q719H9 257 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 NAPBQ9H115 298 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 PNMA2Q9UL42 364 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
CALCOCO2-228ENST00000576582 TTC41PQ6P2S7 1318 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 RAD50Q92878 1312 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 TCF20Q9UGU0 1960 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 RFXAPO00287 272 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 TLL1O43897 1013 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 MYL3P08590 195 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 IQCF3P0C7M6 154 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 PTGS1P23219 599 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 ALDH5A1P51649 535 aaPredicted RBP12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 TAP1Q03518 808 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 BFSP2Q13515 415 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 BAATQ14032 418 aaPredicted RBP12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 NBPF20Q3BBV1 942 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 HERC6Q8IVU3 1022 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 HLA-CQ95604 372 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 LRFN3Q9BTN0 628 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 LMCD1Q9NZU5 365 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
CALCOCO2-228ENST00000576582 GBF1Q92538 1859 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 REV3LO60673 3130 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 A6NJR5 290 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 B4DLN1 442 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 BAIAP3O94812 1187 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 NOVP48745 357 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 SNAP25P60880 206 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 TMEM31Q5JXX7 168 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 TSHZ3Q63HK5 1081 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 PI4K2BQ8TCG2 481 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
CALCOCO2-228ENST00000576582 FTOQ9C0B1 505 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms