RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 ELP1O95163 1332 aa11.28□□□□□ -0.6
NPLOC4-216ENST00000574344 ERICH2A1L162 156 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 B4DLN1 442 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 TLR3O15455 904 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 SMPD1P17405 629 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 CHMLP26374 656 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 MRPL12P52815 198 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 FSCN1Q16658 493 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 IQSEC1Q6DN90 963 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 CCSAPQ6IQ19 270 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 Q7L0L9 218 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 CLEC4DQ8WXI8 215 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 VAT1LQ9HCJ6 419 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 ABCB11O95342 1321 aa11.27□□□□□ -0.61
NPLOC4-216ENST00000574344 GBF1Q92538 1859 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 ARVCFO00192 962 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 PTGS1P23219 599 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 PTH1RQ03431 593 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 FPGSQ05932 587 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 FAAP100Q0VG06 881 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 SHHQ15465 462 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 TAPT1Q6NXT6 567 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-216ENST00000574344 IFIT3O14879 490 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 CABYRO75952 493 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 CYP21A2P08686 494 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 ITGB8P26012 769 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 DUSP28Q4G0W2 176 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 FBXO11Q86XK2 927 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 MORC4Q8TE76 937 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 ANKS1AQ92625 1134 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
NPLOC4-216ENST00000574344 COL6A3P12111 3177 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 E7EWF7 191 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 CTAGE5O15320 804 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 SGSM2O43147 1006 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 MYL3P08590 195 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 CPT1AP50416 773 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 ITGA7Q13683 1181 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 WTAPQ15007 396 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 BRDTQ58F21 947 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 TMEM63BQ5T3F8 832 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 Q9Y3F1 56 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
NPLOC4-216ENST00000574344 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 TRIP12Q14669 1992 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 CFBP00751 764 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 TIMP1P01033 207 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 PSMC6P62333 389 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.616e-7■■□□□ 12.3
NPLOC4-216ENST00000574344 SEC23AQ15436 765 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 FAM126BQ8IXS8 530 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-216ENST00000574344 NKRFO15226 690 aaKnown RBP eCLIP11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TXNP10599 105 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms