RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
CALCOCO2-225ENST00000570513 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 MEIS2O14770 477 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 CFBP00751 764 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 ERVK-9P63128 1117 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 ERVK-24P63145 666 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 HTRA3P83110 453 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 NBR1Q14596 966 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 ANO3Q9BYT9 981 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
CALCOCO2-225ENST00000570513 WNT7AO00755 349 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 FIBPO43427 364 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 HSD17B4P51659 736 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 KRT85P78386 507 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 GHRHRQ02643 423 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 INF2Q27J81 1249 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-225ENST00000570513 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 ERCC3P19447 782 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 COPB2P35606 906 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 INHBEP58166 350 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 TTC38Q5R3I4 469 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.3
CALCOCO2-225ENST00000570513 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 SLC25A27O95847 323 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 TM4SF4P48230 202 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 TRAPPC10P48553 1259 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 CRHR2Q13324 411 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 PORCNQ9H237 461 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
CALCOCO2-225ENST00000570513 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 BCRP11274 1271 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 SREBF1P36956 1147 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 VEGFBP49765 207 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 CCNA1P78396 465 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 Q3C1V9 767 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
CALCOCO2-225ENST00000570513 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms