RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 KRT31Q15323 416 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 KRT25Q7Z3Z0 450 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 CREBRFQ8IUR6 639 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 ZSCAN29Q8IWY8 852 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-214ENST00000567572 ZNF713Q8N859 430 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-214ENST00000567572 ZNRF3Q9ULT6 936 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 PCDHA6Q9UN73 950 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 ATF5Q9Y2D1 282 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-214ENST00000567572 PCDHA8Q9Y5H6 950 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 FRMPD2Q68DX3 1309 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-214ENST00000567572 FAM196BA6NMK8 535 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 CASP1P29466 404 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 STIM1Q13586 685 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
CMTM3-214ENST00000567572 NELFBQ8WX92 580 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 ZMYND12Q9H0C1 365 aa19.92■□□□□ 0.78
CMTM3-214ENST00000567572 GYPCP04921 128 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 COPB1P53618 953 aaKnown RBP19.91■□□□□ 0.78
CMTM3-214ENST00000567572 ZNF543Q08ER8 600 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 CERKLQ49MI3 558 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-214ENST00000567572 TCP11X2Q5H9J9 407 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 NIM1KQ8IY84 436 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 SMYD4Q8IYR2 804 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-214ENST00000567572 ADSSL1Q8N142 457 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 PIGSQ96S52 555 aa19.91■□□□□ 0.78
CMTM3-214ENST00000567572 SEC63Q9UGP8 760 aaKnown RBP19.91■□□□□ 0.78
CMTM3-214ENST00000567572 N4BP3O15049 544 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 EEF1GP26641 437 aaKnown RBP19.9■□□□□ 0.78
CMTM3-214ENST00000567572 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
CMTM3-214ENST00000567572 GPR161Q8N6U8 529 aaKnown RBP19.9■□□□□ 0.78
CMTM3-214ENST00000567572 UBA5Q9GZZ9 404 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 BLZF1Q9H2G9 400 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 KBTBD4Q9NVX7 518 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 MYO1AQ9UBC5 1043 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 HDAC9Q9UKV0 1011 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 A0A1W2PQC6 194 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 KCNJ18B7U540 433 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 KIF5CO60282 957 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 RHOBTB3O94955 611 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 GNA11P29992 359 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 UBA7P41226 1012 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 KCNJ12Q14500 433 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 RASGRP4Q8TDF6 673 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 MKL1Q969V6 931 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 WDR24Q96S15 920 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 CARD6Q9BX69 1037 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 TRIM34Q9BYJ4 488 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 THAP9Q9H5L6 903 aa19.9■□□□□ 0.78
CMTM3-214ENST00000567572 ESYT2A0FGR8 921 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 SOWAHDA6NJG2 315 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 HOXA7P31268 230 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-214ENST00000567572 CASP14P31944 242 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 NAPAP54920 295 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 PPP2R3AQ06190 1150 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 SHROOM1Q2M3G4 852 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-214ENST00000567572 AGBL3Q8NEM8 1001 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 CCDC47Q96A33 483 aaKnown RBP19.89■□□□□ 0.77
CMTM3-214ENST00000567572 KANSL2Q9H9L4 492 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 NYAP2Q9P242 653 aa19.89■□□□□ 0.77
CMTM3-214ENST00000567572 CLCN6P51797 869 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 KARSQ15046 597 aaKnown RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 DLGAP5Q15398 846 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 NAALADL2Q58DX5 795 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 GPATCH4Q5T3I0 446 aaKnown RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 JAKMIP3Q5VZ66 844 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 CYP26C1Q6V0L0 522 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 RAD9BQ6WBX8 426 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 OGFOD1Q8N543 542 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 LRRN4CLQ8ND94 238 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 MRPL44Q9H9J2 332 aaKnown RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 C6orf50Q9HD87 102 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 ABHD10Q9NUJ1 306 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 TMOD2Q9NZR1 351 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 ZBTB12Q9Y330 459 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 PSMA7O14818 248 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 KIF20AO95235 890 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 TMCO3Q6UWJ1 677 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 TMEM179Q6ZVK1 233 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 RSRC2Q7L4I2 434 aaKnown RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 RABGGTAQ92696 567 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 STAMQ92783 540 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 VAT1LQ9HCJ6 419 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 ZNF446Q9NWS9 450 aa19.88■□□□□ 0.77
CMTM3-214ENST00000567572 ZNF70Q9UC06 446 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-214ENST00000567572 EEF2P13639 858 aaKnown RBP19.87■□□□□ 0.77
CMTM3-214ENST00000567572 PRCPP42785 496 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 ATP2B2Q01814 1243 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 NONOQ15233 471 aaKnown RBP eCLIP19.87■□□□□ 0.77
CMTM3-214ENST00000567572 SPDYE2Q495Y8 402 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 MTMR14Q8NCE2 650 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 GIMAP8Q8ND71 665 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-214ENST00000567572 DHTKD1Q96HY7 919 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-214ENST00000567572 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 DESI2Q9BSY9 194 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 TAOK3Q9H2K8 898 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
CMTM3-214ENST00000567572 ZRANB2O95218 330 aaKnown RBP eCLIP19.86■□□□□ 0.77
CMTM3-214ENST00000567572 OR52Z1P0C646 297 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms