RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NOVP48745 357 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 CPT1AP50416 773 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 ALDH5A1P51649 535 aaPredicted RBP24.59■■□□□ 1.53
HERC2-204ENST00000563945 MRPL12P52815 198 aaKnown RBP24.59■■□□□ 1.53
HERC2-204ENST00000563945 MORC4Q8TE76 937 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 NOC4LQ9BVI4 516 aaKnown RBP24.59■■□□□ 1.53
HERC2-204ENST00000563945 SLC4A7Q9Y6M7 1214 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 GRIN2DO15399 1336 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 UMODL1Q5DID0 1318 aa24.59■■□□□ 1.53
HERC2-204ENST00000563945 ZBBXA8MT70 800 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 MYL3P08590 195 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 FGRP09769 529 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 PTGS1P23219 599 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 PDE1AP54750 535 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 PDE4DQ08499 809 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 USP38Q8NB14 1042 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 NKX2-4Q9H2Z4 354 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 TCP11L1Q9NUJ3 509 aa24.58■■□□□ 1.53
HERC2-204ENST00000563945 CXXC1Q9P0U4 656 aaPredicted RBP24.58■■□□□ 1.53
HERC2-204ENST00000563945 RAD50Q92878 1312 aa24.58■■□□□ 1.52
HERC2-204ENST00000563945 NFIBO00712 420 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 AKNAD1Q5T1N1 836 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 TMEM63BQ5T3F8 832 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 RNF207Q6ZRF8 634 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 MFSD6Q6ZSS7 791 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 TICAM2Q86XR7 235 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 OR6J1Q8NGC5 347 aa24.57■■□□□ 1.52
HERC2-204ENST00000563945 ALDH8A1Q9H2A2 487 aaPredicted RBP24.57■■□□□ 1.52
HERC2-204ENST00000563945 TRIM6-TRIM34B2RNG4 842 aa24.56■■□□□ 1.52
HERC2-204ENST00000563945 FAM47CQ5HY64 1035 aa24.56■■□□□ 1.52
HERC2-204ENST00000563945 FAM227BQ96M60 508 aa24.56■■□□□ 1.52
HERC2-204ENST00000563945 TTC14Q96N46 770 aa24.56■■□□□ 1.52
HERC2-204ENST00000563945 SALL3Q9BXA9 1300 aa24.56■■□□□ 1.52
HERC2-204ENST00000563945 NKRFO15226 690 aaKnown RBP eCLIP24.55■■□□□ 1.52
HERC2-204ENST00000563945 HSPD1P10809 573 aaKnown RBP24.55■■□□□ 1.52
HERC2-204ENST00000563945 MFAP1P55081 439 aaKnown RBP24.55■■□□□ 1.52
HERC2-204ENST00000563945 HAND2P61296 217 aa24.55■■□□□ 1.52
HERC2-204ENST00000563945 PPP2R5BQ15173 497 aa24.55■■□□□ 1.52
HERC2-204ENST00000563945 SCLYQ96I15 445 aa24.55■■□□□ 1.52
HERC2-204ENST00000563945 MTG1Q9BT17 334 aaPredicted RBP24.55■■□□□ 1.52
HERC2-204ENST00000563945 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 PDHBP11177 359 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 PCP11498 1178 aaKnown RBP24.54■■□□□ 1.52
HERC2-204ENST00000563945 CCDC85BQ15834 202 aaPredicted RBP24.54■■□□□ 1.52
HERC2-204ENST00000563945 IL27Q8NEV9 243 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 RILPL2Q969X0 211 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 TSPYL2Q9H2G4 693 aaPredicted RBP24.54■■□□□ 1.52
HERC2-204ENST00000563945 RNF41Q9H4P4 317 aaPredicted RBP24.54■■□□□ 1.52
HERC2-204ENST00000563945 PRDM6Q9NQX0 595 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 TNKSO95271 1327 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 TTC28Q96AY4 2481 aa24.54■■□□□ 1.52
HERC2-204ENST00000563945 KPNA6O60684 536 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 PFKMP08237 780 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 ACTN1P12814 892 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 RRP1P56182 461 aaKnown RBP24.53■■□□□ 1.52
HERC2-204ENST00000563945 PURAQ00577 322 aaKnown RBP24.53■■□□□ 1.52
HERC2-204ENST00000563945 ZNF543Q08ER8 600 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 NMIQ13287 307 aaPredicted RBP24.53■■□□□ 1.52
HERC2-204ENST00000563945 SLC30A10Q6XR72 485 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 RETREG2Q8NC44 543 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 SCFD2Q8WU76 684 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 ATXN2LQ8WWM7 1075 aaKnown RBP24.53■■□□□ 1.52
HERC2-204ENST00000563945 WNT8AQ9H1J5 351 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 TRMT13Q9NUP7 481 aaKnown RBP24.53■■□□□ 1.52
HERC2-204ENST00000563945 THEGQ9P2T0 379 aa24.53■■□□□ 1.52
HERC2-204ENST00000563945 RBM47A0AV96 593 aaKnown RBP24.52■■□□□ 1.52
HERC2-204ENST00000563945 CYP2C9P11712 490 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 PPP2R2DQ66LE6 453 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 DEFB128Q7Z7B8 93 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 DNERQ8NFT8 737 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 CLEC4DQ8WXI8 215 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 ESR2Q92731 530 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 CRBNQ96SW2 442 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 NOD1Q9Y239 953 aa24.52■■□□□ 1.52
HERC2-204ENST00000563945 TXNP10599 105 aaKnown RBP24.51■■□□□ 1.51
HERC2-204ENST00000563945 ATP2A2P16615 1042 aaKnown RBP24.51■■□□□ 1.51
HERC2-204ENST00000563945 RABGGTBP53611 331 aa24.51■■□□□ 1.51
HERC2-204ENST00000563945 RPS6P62753 249 aaKnown RBP24.51■■□□□ 1.51
HERC2-204ENST00000563945 GPATCH4Q5T3I0 446 aaKnown RBP24.51■■□□□ 1.51
HERC2-204ENST00000563945 YBX2Q9Y2T7 364 aaKnown RBP24.51■■□□□ 1.51
HERC2-204ENST00000563945 PCDHA11Q9Y5I1 949 aa24.51■■□□□ 1.51
HERC2-204ENST00000563945 ZMYM6O95789 1325 aa24.51■■□□□ 1.51
HERC2-204ENST00000563945 CCDC171Q6TFL3 1326 aa24.51■■□□□ 1.51
HERC2-204ENST00000563945 WDR19Q8NEZ3 1342 aa24.51■■□□□ 1.51
HERC2-204ENST00000563945 LRRC37A2A6NM11 1700 aa24.5■■□□□ 1.51
HERC2-204ENST00000563945 TNFRSF10AO00220 468 aa24.5■■□□□ 1.51
HERC2-204ENST00000563945 CHMP4BP1P59074 171 aa24.5■■□□□ 1.51
HERC2-204ENST00000563945 HDAC1Q13547 482 aaPredicted RBP24.5■■□□□ 1.51
HERC2-204ENST00000563945 NBPF20Q3BBV1 942 aa24.5■■□□□ 1.51
HERC2-204ENST00000563945 CCDC178Q5BJE1 867 aa24.5■■□□□ 1.51
HERC2-204ENST00000563945 MRPS5P82675 430 aaKnown RBP24.49■■□□□ 1.51
HERC2-204ENST00000563945 ADGRE1Q14246 886 aa24.49■■□□□ 1.51
HERC2-204ENST00000563945 TTLL4Q14679 1199 aa24.49■■□□□ 1.51
HERC2-204ENST00000563945 USH1GQ495M9 461 aa24.49■■□□□ 1.51
HERC2-204ENST00000563945 ZNF589Q86UQ0 364 aaPredicted RBP24.49■■□□□ 1.51
HERC2-204ENST00000563945 ZNF213O14771 459 aa24.48■■□□□ 1.51
HERC2-204ENST00000563945 RFC2P35250 354 aa24.48■■□□□ 1.51
HERC2-204ENST00000563945 PTPN11Q06124 597 aaPredicted RBP24.48■■□□□ 1.51
HERC2-204ENST00000563945 TMEM67Q5HYA8 995 aa24.48■■□□□ 1.51
HERC2-204ENST00000563945 NFRKBQ6P4R8 1299 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms