RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 ANKRD20A12PQ8NF67 263 aa21.92■■□□□ 1.1
CDH5-204ENST00000563425 GLT8D2Q9H1C3 349 aa21.92■■□□□ 1.1
CDH5-204ENST00000563425 PSTPIP2Q9H939 334 aa21.92■■□□□ 1.1
CDH5-204ENST00000563425 PPIP5K2O43314 1243 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 AMPD3Q01432 767 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 ICA1Q05084 483 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 EN1Q05925 392 aaPredicted RBP21.91■■□□□ 1.1
CDH5-204ENST00000563425 RBL2Q08999 1139 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 QRICH1Q2TAL8 776 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 CCDC47Q96A33 483 aaKnown RBP21.91■■□□□ 1.1
CDH5-204ENST00000563425 ATF5Q9Y2D1 282 aaPredicted RBP21.91■■□□□ 1.1
CDH5-204ENST00000563425 PPP2R2CQ9Y2T4 447 aa21.91■■□□□ 1.1
CDH5-204ENST00000563425 PSMA7O14818 248 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 N4BP3O15049 544 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 CCT6AP40227 531 aaKnown RBP21.9■■□□□ 1.1
CDH5-204ENST00000563425 GRB10Q13322 594 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 ABCB5Q2M3G0 1257 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 IRF2BP1Q8IU81 584 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 GTPBP4Q9BZE4 634 aaKnown RBP21.9■■□□□ 1.1
CDH5-204ENST00000563425 RAB34Q9BZG1 259 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 STK17AQ9UEE5 414 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 TRIM49BA6NDI0 452 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 ETF1P62495 437 aaKnown RBP21.9■■□□□ 1.1
CDH5-204ENST00000563425 SYT10Q6XYQ8 523 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 DHTKD1Q96HY7 919 aaPredicted RBP21.9■■□□□ 1.1
CDH5-204ENST00000563425 PRMT6Q96LA8 375 aaPredicted RBP21.9■■□□□ 1.1
CDH5-204ENST00000563425 PNMA5Q96PV4 448 aa21.9■■□□□ 1.1
CDH5-204ENST00000563425 C21orf2O43822 256 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 PMS1P54277 932 aaKnown RBP21.89■■□□□ 1.09
CDH5-204ENST00000563425 GMCL1P1Q8NEA9 526 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 ANKRD7Q92527 254 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 VPS16Q9H269 839 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 BLOC1S4Q9NUP1 217 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 EXOC1Q9NV70 894 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 TAB2Q9NYJ8 693 aa21.89■■□□□ 1.09
CDH5-204ENST00000563425 RAD21O60216 631 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 GCFC2P16383 781 aaKnown RBP21.88■■□□□ 1.09
CDH5-204ENST00000563425 ASIC1P78348 528 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 PDE4DQ08499 809 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 GRIPAP1Q4V328 841 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 TRIM65Q6PJ69 517 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 NAA15Q9BXJ9 866 aaKnown RBP21.88■■□□□ 1.09
CDH5-204ENST00000563425 THAP9Q9H5L6 903 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 DDX25Q9UHL0 483 aaKnown RBP21.88■■□□□ 1.09
CDH5-204ENST00000563425 PCDHA1Q9Y5I3 950 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 MFAP3LO75121 409 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 GDF11O95390 407 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 CDC37Q16543 378 aaPredicted RBP21.88■■□□□ 1.09
CDH5-204ENST00000563425 TTI2Q6NXR4 508 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 SV2BQ7L1I2 683 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
CDH5-204ENST00000563425 NAP1L4Q99733 375 aaKnown RBP21.88■■□□□ 1.09
CDH5-204ENST00000563425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.88■■□□□ 1.09
CDH5-204ENST00000563425 PHLPP2Q6ZVD8 1323 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 GOLGA6L9A6NEM1 432 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 F5H6K3 240 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 GYPCP04921 128 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 EEF1GP26641 437 aaKnown RBP21.87■■□□□ 1.09
CDH5-204ENST00000563425 PPP1R2P41236 205 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 KLRC3Q07444 240 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 COBLL1Q53SF7 1204 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 TOGARAM2Q6ZUX3 1019 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 NOC3LQ8WTT2 800 aaKnown RBP21.87■■□□□ 1.09
CDH5-204ENST00000563425 HAS1Q92839 578 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 L2HGDHQ9H9P8 463 aa21.87■■□□□ 1.09
CDH5-204ENST00000563425 POTEMA6NI47 508 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 CASP14P31944 242 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 NCBP1Q09161 790 aaKnown RBP21.86■■□□□ 1.09
CDH5-204ENST00000563425 CNGA4Q8IV77 575 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 CPLX3Q8WVH0 158 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 CCDC51Q96ER9 411 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 CDK5RAP3Q96JB5 506 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 TRIM47Q96LD4 638 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 FECHP22830 423 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 CCNE1P24864 410 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 JAG1P78504 1218 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 STK4Q13043 487 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 RBM26Q5T8P6 1007 aaKnown RBP21.86■■□□□ 1.09
CDH5-204ENST00000563425 KRT79Q5XKE5 535 aa21.86■■□□□ 1.09
CDH5-204ENST00000563425 LARP4BQ92615 738 aaKnown RBP21.86■■□□□ 1.09
CDH5-204ENST00000563425 DUSP9Q99956 384 aaKnown RBP21.86■■□□□ 1.09
CDH5-204ENST00000563425 BICDL2A1A5D9 508 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L15C9J2P7 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L13C9JLJ4 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L11C9JVI0 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L18D6R9N7 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L22D6RA61 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L17D6RBQ6 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L19D6RCP7 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L20D6RJB6 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 NDUFB10O96000 172 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 TPM1P09493 284 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L24Q0WX57 530 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 TRIM14Q14142 442 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 MCM6Q14566 821 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 TMEM119Q4V9L6 283 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 CNNM4Q6P4Q7 775 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 RSBN1LQ6PCB5 846 aaPredicted RBP21.85■■□□□ 1.09
CDH5-204ENST00000563425 USP17L6PQ6QN14 398 aa21.85■■□□□ 1.09
CDH5-204ENST00000563425 TTLL6Q8N841 843 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms