RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SNX17Q15036 470 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 TSGA10IPQ3SY00 556 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 C1orf53Q5VUE5 145 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 EEPD1Q7L9B9 569 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 MCF2L2Q86YR7 1114 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 PDGFCQ9NRA1 345 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 PPP4R2Q9NY27 417 aa22.12■■□□□ 1.13
TRADD-203ENST00000563348 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
TRADD-203ENST00000563348 MOXD2PA6NHM9 499 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
TRADD-203ENST00000563348 LIFRP42702 1097 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 ACLYP53396 1101 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 NKX3-2P78367 333 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 KCNA10Q16322 511 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 FBXO16Q8IX29 292 aaPredicted RBP22.11■■□□□ 1.13
TRADD-203ENST00000563348 ZNF654Q8IZM8 581 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 NUP133Q8WUM0 1156 aa22.11■■□□□ 1.13
TRADD-203ENST00000563348 GNEQ9Y223 722 aaKnown RBP22.11■■□□□ 1.13
TRADD-203ENST00000563348 MYADML2A6NDP7 307 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 CYTH3O43739 400 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 PPP1R11O60927 126 aaPredicted RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 DDAH1O94760 285 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 SMPD1P17405 629 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 EDNRBP24530 442 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 IRX5P78411 483 aaPredicted RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 DNAH12Q6ZR08 3092 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 NOL8Q76FK4 1167 aaKnown RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 RASEFQ8IZ41 740 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 PCSK9Q8NBP7 692 aaKnown RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 SYTL5Q8TDW5 730 aaPredicted RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 PIGSQ96S52 555 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 MPHOSPH6Q99547 160 aaKnown RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 GDF15Q99988 308 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 BAZ2BQ9UIF8 2168 aaKnown RBP22.1■■□□□ 1.13
TRADD-203ENST00000563348 ATP11BQ9Y2G3 1177 aa22.1■■□□□ 1.13
TRADD-203ENST00000563348 A0A1W2PQ45 241 aaPredicted RBP22.09■■□□□ 1.13
TRADD-203ENST00000563348 A0A1W2PQY0 241 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 RBM47A0AV96 593 aaKnown RBP22.09■■□□□ 1.13
TRADD-203ENST00000563348 B4DLN1 442 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 CTAGE5O15320 804 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
TRADD-203ENST00000563348 MRPL12P52815 198 aaKnown RBP22.09■■□□□ 1.13
TRADD-203ENST00000563348 TRAF1Q13077 416 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 GNASQ5JWF2 1037 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 NFXL1Q6ZNB6 911 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 CTCFLQ8NI51 663 aaPredicted RBP22.09■■□□□ 1.13
TRADD-203ENST00000563348 NEK1Q96PY6 1258 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 Q9Y3F1 56 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 PCDHA1Q9Y5I3 950 aa22.09■■□□□ 1.13
TRADD-203ENST00000563348 PNMA6FA0A0J9YX94 578 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 CCDC69A6NI79 296 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 SMARCA1P28370 1054 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 KIF5BP33176 963 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 BMP8BP34820 402 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 PDE4DQ08499 809 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 TRIM60Q495X7 471 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 HOMER1Q86YM7 354 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 TAAR1Q96RJ0 339 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 MYL10Q9BUA6 226 aa22.08■■□□□ 1.13
TRADD-203ENST00000563348 LCTP09848 1927 aa22.08■■□□□ 1.12
TRADD-203ENST00000563348 OPLAHO14841 1288 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 DYNC1LI2O43237 492 aaPredicted RBP22.07■■□□□ 1.12
TRADD-203ENST00000563348 MAGEA10P43363 369 aaPredicted RBP22.07■■□□□ 1.12
TRADD-203ENST00000563348 EXOSC10Q01780 885 aaKnown RBP22.07■■□□□ 1.12
TRADD-203ENST00000563348 GHRHRQ02643 423 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 DUSP28Q4G0W2 176 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 TMEM63BQ5T3F8 832 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 NSUN6Q8TEA1 469 aaKnown RBP22.07■■□□□ 1.12
TRADD-203ENST00000563348 LZTS2Q9BRK4 669 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 LRRC2Q9BYS8 371 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 WDR11Q9BZH6 1224 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 AP5M1Q9H0R1 490 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 STARD7Q9NQZ5 370 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 MAP3K20Q9NYL2 800 aaKnown RBP22.07■■□□□ 1.12
TRADD-203ENST00000563348 COL20A1Q9P218 1284 aa22.07■■□□□ 1.12
TRADD-203ENST00000563348 ELP1O95163 1332 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 CFBP00751 764 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 ASGR1P07306 291 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 GNAQP50148 359 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 TLE2Q04725 743 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 KRT32Q14532 448 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 DHX32Q7L7V1 743 aaKnown RBP22.06■■□□□ 1.12
TRADD-203ENST00000563348 TLK2Q86UE8 772 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 SAMD3Q8N6K7 520 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 KCNB2Q92953 911 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 GLT1D1Q96MS3 346 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 RMDN3Q96TC7 470 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 SLC12A7Q9Y666 1083 aa22.06■■□□□ 1.12
TRADD-203ENST00000563348 A0A1W2PPC1 479 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 CALM1P0DP23 149 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 CALM2P0DP24 149 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 CALM3P0DP25 149 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 PTGS1P23219 599 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 HSD17B4P51659 736 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 BEX3Q00994 111 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 ADCK5Q3MIX3 580 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 IWS1Q96ST2 819 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 SPZ1Q9BXG8 430 aa22.05■■□□□ 1.12
TRADD-203ENST00000563348 PRKAG2Q9UGJ0 569 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms