RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
HDGFL3-202ENST00000562702 POU4F1Q01851 419 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 CACNB2Q08289 660 aaPredicted RBP5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 SEZ6Q53EL9 994 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 SH3RF3Q8TEJ3 882 aaPredicted RBP5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 FAM161BQ96MY7 647 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 PTCHD1Q96NR3 888 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 KCNQ5Q9NR82 932 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
HDGFL3-202ENST00000562702 H0Y8X5 98 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 GREM1O60565 184 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 FZD7O75084 574 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 CYP2C8P10632 490 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 SURF1Q15526 300 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 RGL3Q3MIN7 710 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 NETO2Q8NC67 525 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 SCAND2PQ9GZW5 306 aaPredicted RBP5.53□□□□□ -1.52
HDGFL3-202ENST00000562702 MEIS3P2A8K0S8 358 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 GLI4P10075 376 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 ERCC3P19447 782 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 APOBRQ0VD83 1088 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 ZNF296Q8WUU4 475 aaPredicted RBP5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 SPATA6Q9NWH7 488 aaPredicted RBP5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 TSC22D4Q9Y3Q8 395 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 FHOD1Q9Y613 1164 aa5.52□□□□□ -1.53
HDGFL3-202ENST00000562702 MROH6A6NGR9 719 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 CD3EP07766 207 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 PMS1P54277 932 aaKnown RBP5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 CLCQ05315 142 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 ANKRD39Q53RE8 183 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 FAM26FQ5R3K3 315 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 TMCO4Q5TGY1 634 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 ERMP1Q7Z2K6 904 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 USP33Q8TEY7 942 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 FCRL3Q96P31 734 aaPredicted RBP5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 NOX5Q96PH1 765 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 SLC9A7Q96T83 725 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 INVSQ9Y283 1065 aa5.51□□□□□ -1.53
HDGFL3-202ENST00000562702 ITGA4P13612 1032 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 RPL13P26373 211 aaKnown RBP5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 SMAD4Q13485 552 aaKnown RBP5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 EEF1DP3Q658K8 133 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 PLEKHH3Q7Z736 793 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 FIBCD1Q8N539 461 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 LINC00482Q8N8I6 264 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 BRF1Q92994 677 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 RNF34Q969K3 372 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 GP6Q9HCN6 339 aa5.5□□□□□ -1.53
HDGFL3-202ENST00000562702 ACVRL1P37023 503 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 CRKP46108 304 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 ZNF445P59923 1031 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 CRIP3Q6Q6R5 217 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 SPRED1Q7Z699 444 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 NKD1Q969G9 470 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 DDX11Q96FC9 970 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 VPS11Q9H270 941 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 RXFP1Q9HBX9 757 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 ST6GALNAC2Q9UJ37 374 aa5.49□□□□□ -1.53
HDGFL3-202ENST00000562702 FAM86C2PA6NEL3 165 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 C9IYK1 514 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 SHOXO15266 292 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 SLPIP03973 132 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 IMPDH2P12268 514 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 KRTAP1-1Q07627 177 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 TCEAL1Q15170 157 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 RCSD1Q6JBY9 416 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 TTLL6Q8N841 843 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 LCORQ96JN0 433 aaPredicted RBP5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 COPRSQ9NQ92 184 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 UBP1Q9NZI7 540 aa5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 DIS3Q9Y2L1 958 aaKnown RBP5.48□□□□□ -1.53
HDGFL3-202ENST00000562702 A0A087WZG4 1122 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 IFNGR1P15260 489 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 CD247P20963 164 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 THBS2P35442 1172 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 TDRD10Q5VZ19 366 aaKnown RBP5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 DCAF15Q66K64 600 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 HS2ST1Q7LGA3 356 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 KYQ8NBH2 561 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 ZDHHC15Q96MV8 337 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 C11orf84Q9BUA3 381 aaPredicted RBP5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 NOL6Q9H6R4 1146 aaKnown RBP5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 RWDD3Q9Y3V2 267 aa5.47□□□□□ -1.53
HDGFL3-202ENST00000562702 TRBV23OR9-2A0A075B6M9 112 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 SEPHS1P49903 392 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 CRB2Q5IJ48 1285 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 WWC2Q6AWC2 1192 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 MCTP2Q6DN12 878 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 ETV3LQ6ZN32 361 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 LIMS2Q7Z4I7 341 aa5.46□□□□□ -1.54
HDGFL3-202ENST00000562702 KLC2Q9H0B6 622 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms