RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 GRB10Q13322 594 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 KCNA10Q16322 511 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 SHROOM1Q2M3G4 852 aaPredicted RBP6.57□□□□□ -1.36
HERC1-213ENST00000561359 LEXMQ3ZCV2 418 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 CRACR2BQ8N4Y2 399 aaPredicted RBP6.57□□□□□ -1.36
HERC1-213ENST00000561359 KLHDC4Q8TBB5 520 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
HERC1-213ENST00000561359 MAML3Q96JK9 1138 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 PRRX2Q99811 253 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 MOV10L1Q9BXT6 1211 aaKnown RBP6.57□□□□□ -1.36
HERC1-213ENST00000561359 HIPK3Q9H422 1215 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 FAM86C1Q9NVL1 165 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 PI4KBQ9UBF8 816 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 NRBP1Q9UHY1 535 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 PKD1L2Q7Z442 2459 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 DCHS1Q96JQ0 3298 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 MROH7-TTC4A0A0A0MT08 1334 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 ELP1O95163 1332 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 GPR75-ASB3A0A0A6YYF3 556 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 A0A0U1RQG5 324 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 ARVCFO00192 962 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 ADAMTS4O75173 837 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 ERCC3P19447 782 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 CDK7P50613 346 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 MCCD1P59942 119 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 TAP1Q03518 808 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 PLS1Q14651 629 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 RNF20Q5VTR2 975 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 SLC4A10Q6U841 1118 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 LBX2Q6XYB7 198 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 NCAPG2Q86XI2 1143 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 NPAS3Q8IXF0 933 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 RPUSD2Q8IZ73 545 aaKnown RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 IRF7Q92985 503 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 BICC1Q9H694 974 aaKnown RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 POLMQ9NP87 494 aaPredicted RBP6.56□□□□□ -1.36
HERC1-213ENST00000561359 CYLDQ9NQC7 956 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 ZBTB21Q9ULJ3 1066 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 ADAMTS8Q9UP79 889 aa6.56□□□□□ -1.36
HERC1-213ENST00000561359 SMCHD1A6NHR9 2005 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 UMODL1Q5DID0 1318 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 SYNRGQ9UMZ2 1314 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 KIF28PB7ZC32 967 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 APAF1O14727 1248 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 SPINT1O43278 529 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ALDH1L1O75891 902 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 MAP4K4O95819 1239 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 ASGR1P07306 291 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ADH1AP07327 375 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 FCER1AP12319 257 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 VCAM1P19320 739 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 PHKA1P46020 1223 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ID4P47928 161 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 USP14P54578 494 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 TCF15Q12870 199 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.55□□□□□ -1.36
HERC1-213ENST00000561359 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 ERICH6Q7L0X2 663 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ABRAQ8N0Z2 381 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 PCSK9Q8NBP7 692 aaKnown RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 KLHDC9Q8NEP7 349 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 GDPD5Q8WTR4 605 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 ATOH1Q92858 354 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 KAZALD1Q96I82 304 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 C12orf42Q96LP6 360 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 UPF3BQ9BZI7 483 aaKnown RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 SPATC1LQ9H0A9 340 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 RPAP3Q9H6T3 665 aaPredicted RBP6.55□□□□□ -1.36
HERC1-213ENST00000561359 SPC25Q9HBM1 224 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 CNPY2Q9Y2B0 182 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 NCOR2Q9Y618 2525 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 BAHCC1Q9P281 2608 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 WDR87Q6ZQQ6 2873 aa6.55□□□□□ -1.36
HERC1-213ENST00000561359 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.54□□□□□ -1.36
HERC1-213ENST00000561359 MYADML2A6NDP7 307 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 LPXNO60711 386 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 ARHGEF15O94989 841 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 GH2P01242 217 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 LDHCP07864 332 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
HERC1-213ENST00000561359 ZNF865P0CJ78 1059 aaPredicted RBP6.54□□□□□ -1.36
HERC1-213ENST00000561359 MECOMQ03112 1051 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 ZP2Q05996 745 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 ATP2B3Q16720 1220 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 RABL6Q3YEC7 729 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms