RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 PSMA5P28066 241 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 ALDH5A1P51649 535 aaPredicted RBP14.02□□□□□ -0.16
USP8-212ENST00000560730 ACVR2BQ13705 512 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 BRF1Q92994 677 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 FAM217BQ9NTX9 383 aaPredicted RBP14.02□□□□□ -0.16
USP8-212ENST00000560730 COL20A1Q9P218 1284 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.16
USP8-212ENST00000560730 MRPL11Q9Y3B7 192 aaKnown RBP14.02□□□□□ -0.16
USP8-212ENST00000560730 ASB14A6NK59 587 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 ZBTB43O43298 467 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 ADCY6O43306 1168 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 MSCO60682 206 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 GNAQP50148 359 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 FGD1P98174 961 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 SYNE3Q6ZMZ3 975 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 TMTC3Q6ZXV5 915 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
USP8-212ENST00000560730 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 AGXT2Q9BYV1 514 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 UPF3BQ9BZI7 483 aaKnown RBP14.01□□□□□ -0.17
USP8-212ENST00000560730 ABHD16BQ9H3Z7 469 aa14.01□□□□□ -0.17
USP8-212ENST00000560730 CEP290O15078 2479 aa14□□□□□ -0.17
USP8-212ENST00000560730 CFBP00751 764 aa14□□□□□ -0.17
USP8-212ENST00000560730 CAPN2P17655 700 aa14□□□□□ -0.17
USP8-212ENST00000560730 CDC27P30260 824 aa14□□□□□ -0.17
USP8-212ENST00000560730 FUT2Q10981 343 aa14□□□□□ -0.17
USP8-212ENST00000560730 TOB2Q14106 344 aaPredicted RBP14□□□□□ -0.17
USP8-212ENST00000560730 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
USP8-212ENST00000560730 GJC2Q5T442 439 aaPredicted RBP14□□□□□ -0.17
USP8-212ENST00000560730 EEPD1Q7L9B9 569 aa14□□□□□ -0.17
USP8-212ENST00000560730 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
USP8-212ENST00000560730 TM6SF1Q9BZW5 370 aa14□□□□□ -0.17
USP8-212ENST00000560730 PDGFCQ9NRA1 345 aa14□□□□□ -0.17
USP8-212ENST00000560730 FAM184BQ9ULE4 1060 aa14□□□□□ -0.17
USP8-212ENST00000560730 NAP1L2Q9ULW6 460 aaPredicted RBP14□□□□□ -0.17
USP8-212ENST00000560730 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
USP8-212ENST00000560730 GOLGA8AA7E2F4 631 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 PGK1P00558 417 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 AKR1A1P14550 325 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 PTGS1P23219 599 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 HSD17B4P51659 736 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
USP8-212ENST00000560730 RTN1Q16799 776 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 TMEM63BQ5T3F8 832 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 MCF2L2Q86YR7 1114 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
USP8-212ENST00000560730 FBXL16Q8N461 479 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
USP8-212ENST00000560730 ADD3Q9UEY8 706 aaKnown RBP13.99□□□□□ -0.17
USP8-212ENST00000560730 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 KIAA1217Q5T5P2 1943 aa13.99□□□□□ -0.17
USP8-212ENST00000560730 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
USP8-212ENST00000560730 RARBP10826 455 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 COL6A1P12109 1028 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
USP8-212ENST00000560730 ADD1P35611 737 aaKnown RBP13.98□□□□□ -0.17
USP8-212ENST00000560730 GHRHRQ02643 423 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 LRRC41Q15345 812 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 TAPT1Q6NXT6 567 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 DNERQ8NFT8 737 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 XPNPEP3Q9NQH7 507 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 EDNRBP24530 442 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 ARRDC4Q8NCT1 418 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 MAF1Q9H063 256 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
USP8-212ENST00000560730 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
USP8-212ENST00000560730 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
USP8-212ENST00000560730 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
USP8-212ENST00000560730 SMPD1P17405 629 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 PDIA3P30101 505 aaKnown RBP13.97□□□□□ -0.17
USP8-212ENST00000560730 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP8-212ENST00000560730 RCAN1P53805 252 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 EVCP57679 992 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 TNFAIP2Q03169 654 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 PDE4DQ08499 809 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 TRAF1Q13077 416 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 DPF3Q92784 378 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
USP8-212ENST00000560730 VTA1Q9NP79 307 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 V9GY48 417 aaPredicted RBP13.97□□□□□ -0.17
USP8-212ENST00000560730 SYNRGQ9UMZ2 1314 aa13.97□□□□□ -0.17
USP8-212ENST00000560730 LOC102724159A0A0B4J2E5 919 aa13.96□□□□□ -0.18
USP8-212ENST00000560730 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.18
USP8-212ENST00000560730 DNM1LO00429 736 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms