RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 RPS6P62753 249 aaKnown RBP24.99■■□□□ 1.59
SNX1-206ENST00000559389 BAATQ14032 418 aaPredicted RBP24.99■■□□□ 1.59
SNX1-206ENST00000559389 FGD4Q96M96 766 aa24.99■■□□□ 1.59
SNX1-206ENST00000559389 LLPHQ9BRT6 129 aaKnown RBP24.99■■□□□ 1.59
SNX1-206ENST00000559389 SLC5A4Q9NY91 659 aa24.99■■□□□ 1.59
SNX1-206ENST00000559389 DIS3Q9Y2L1 958 aaKnown RBP24.99■■□□□ 1.59
SNX1-206ENST00000559389 LRRC37A2A6NM11 1700 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 POTEB2H3BUK9 544 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 JAK2O60674 1132 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 DTNBO60941 627 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 NAPAP54920 295 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 SAMD3Q8N6K7 520 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 SLAIN1Q8ND83 568 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 PXYLP1Q8TE99 480 aa24.98■■□□□ 1.59
SNX1-206ENST00000559389 ADCY3O60266 1144 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 CFBP00751 764 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 CNTN2Q02246 1040 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 CCL14Q16627 93 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 TRIB2Q92519 343 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 TBC1D5Q92609 795 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 SNX21Q969T3 373 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 MAML3Q96JK9 1138 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 MCOLN1Q9GZU1 580 aa24.97■■□□□ 1.59
SNX1-206ENST00000559389 ORC3Q9UBD5 711 aaPredicted RBP24.97■■□□□ 1.59
SNX1-206ENST00000559389 ASTN1O14525 1302 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 ESYT2A0FGR8 921 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 IGHA2P01877 340 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 CALML3P27482 149 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 OLFML2BQ68BL8 750 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 ZNF467Q7Z7K2 595 aaPredicted RBP24.96■■□□□ 1.59
SNX1-206ENST00000559389 TRMT44Q8IYL2 757 aaKnown RBP24.96■■□□□ 1.59
SNX1-206ENST00000559389 SMARCC2Q8TAQ2 1214 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 SYTL5Q8TDW5 730 aaPredicted RBP24.96■■□□□ 1.59
SNX1-206ENST00000559389 SHISA4Q96DD7 197 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 MAP3K20Q9NYL2 800 aaKnown RBP24.96■■□□□ 1.59
SNX1-206ENST00000559389 FLRT1Q9NZU1 646 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 COL20A1Q9P218 1284 aa24.96■■□□□ 1.59
SNX1-206ENST00000559389 SOWAHBA6NEL2 793 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 GCOM1H8Y6P7 765 aaPredicted RBP24.95■■□□□ 1.58
SNX1-206ENST00000559389 PIK3CDO00329 1044 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 POLR2MP0CAP2 368 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 FDPSP14324 419 aaKnown RBP24.95■■□□□ 1.58
SNX1-206ENST00000559389 ELNP15502 786 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 GRK4P32298 578 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 CCDC148Q8NFR7 591 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 CCDC12Q8WUD4 166 aaPredicted RBP24.95■■□□□ 1.58
SNX1-206ENST00000559389 AIFM3Q96NN9 605 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 VPS54Q9P1Q0 977 aa24.95■■□□□ 1.58
SNX1-206ENST00000559389 HOXA13P31271 388 aaPredicted RBP24.94■■□□□ 1.58
SNX1-206ENST00000559389 COL13A1Q5TAT6 717 aaPredicted RBP24.94■■□□□ 1.58
SNX1-206ENST00000559389 TEX2Q8IWB9 1127 aa24.94■■□□□ 1.58
SNX1-206ENST00000559389 PURBQ96QR8 312 aaKnown RBP24.94■■□□□ 1.58
SNX1-206ENST00000559389 PSTPIP2Q9H939 334 aa24.94■■□□□ 1.58
SNX1-206ENST00000559389 SH3GLB2Q9NR46 395 aa24.94■■□□□ 1.58
SNX1-206ENST00000559389 K7ELQ4 463 aaPredicted RBP24.93■■□□□ 1.58
SNX1-206ENST00000559389 MEIS2O14770 477 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 HMGCRP04035 888 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 ADCY7P51828 1080 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 FAM177A1Q8N128 213 aaPredicted RBP24.93■■□□□ 1.58
SNX1-206ENST00000559389 WASF1Q92558 559 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 CUL5Q93034 780 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 ZMYND12Q9H0C1 365 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 RIC8AQ9NPQ8 531 aa24.93■■□□□ 1.58
SNX1-206ENST00000559389 ALDH5A1P51649 535 aaPredicted RBP24.92■■□□□ 1.58
SNX1-206ENST00000559389 HMGN5P82970 282 aaKnown RBP24.92■■□□□ 1.58
SNX1-206ENST00000559389 CUL4AQ13619 759 aa24.92■■□□□ 1.58
SNX1-206ENST00000559389 SLC9C1Q4G0N8 1177 aa24.92■■□□□ 1.58
SNX1-206ENST00000559389 MAMDC4Q6UXC1 1216 aa24.92■■□□□ 1.58
SNX1-206ENST00000559389 MSL3Q8N5Y2 521 aaKnown RBP24.92■■□□□ 1.58
SNX1-206ENST00000559389 DNERQ8NFT8 737 aa24.92■■□□□ 1.58
SNX1-206ENST00000559389 ALG1Q9BT22 464 aa24.92■■□□□ 1.58
SNX1-206ENST00000559389 ADD3Q9UEY8 706 aaKnown RBP24.92■■□□□ 1.58
SNX1-206ENST00000559389 LOC102724159A0A0B4J2E5 919 aa24.91■■□□□ 1.58
SNX1-206ENST00000559389 SMCO2A6NFE2 343 aa24.91■■□□□ 1.58
SNX1-206ENST00000559389 PWP2Q15269 919 aaKnown RBP24.91■■□□□ 1.58
SNX1-206ENST00000559389 USP17L6PQ6QN14 398 aa24.91■■□□□ 1.58
SNX1-206ENST00000559389 SH3TC2Q8TF17 1288 aa24.91■■□□□ 1.58
SNX1-206ENST00000559389 GLT8D2Q9H1C3 349 aa24.91■■□□□ 1.58
SNX1-206ENST00000559389 FRMPD4Q14CM0 1322 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 SYNGAP1Q96PV0 1343 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 INHAP05111 366 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 MRPL12P52815 198 aaKnown RBP24.9■■□□□ 1.58
SNX1-206ENST00000559389 UBE2SQ16763 222 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 MFSD14CQ5VZR4 134 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 HSCBQ8IWL3 235 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 ARMC5Q96C12 935 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 TAAR1Q96RJ0 339 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 TINF2Q9BSI4 451 aa24.9■■□□□ 1.58
SNX1-206ENST00000559389 EDNRBP24530 442 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 CYP2C19P33261 490 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 CLK2P49760 499 aaKnown RBP24.89■■□□□ 1.58
SNX1-206ENST00000559389 TRIM32Q13049 653 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 MAP3K21Q5TCX8 1036 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 ARMCX2Q7L311 632 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 FCHSD1Q86WN1 690 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 MORC4Q8TE76 937 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 C6orf50Q9HD87 102 aa24.89■■□□□ 1.58
SNX1-206ENST00000559389 MCM3APO60318 1980 aa24.89■■□□□ 1.57
SNX1-206ENST00000559389 RPTORQ8N122 1335 aa24.88■■□□□ 1.57
SNX1-206ENST00000559389 ASB14A6NK59 587 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms