RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 POSTNQ15063 836 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 IL17AQ16552 155 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 PRAMEF18Q5VWM3 479 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 CCDC174Q6PII3 467 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 CCDC84Q86UT8 332 aaPredicted RBP15.6■□□□□ 0.09
TPM1-215ENST00000558868 SAMD3Q8N6K7 520 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 ZKSCAN4Q969J2 545 aaPredicted RBP15.6■□□□□ 0.09
TPM1-215ENST00000558868 C12orf42Q96LP6 360 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 PANK2Q9BZ23 570 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 CCSER1Q9C0I3 900 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 TMEM60Q9H2L4 133 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 CYP3A7-CYP3A51PA0A087WV96 503 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L15C9J2P7 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L13C9JLJ4 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L11C9JVI0 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L18D6R9N7 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L22D6RA61 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L17D6RBQ6 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L19D6RCP7 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L20D6RJB6 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 GCOM1H8Y6P7 765 aaPredicted RBP15.59■□□□□ 0.09
TPM1-215ENST00000558868 MARCH6O60337 910 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 ZBED4O75132 1171 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP2O75604 605 aaPredicted RBP15.59■□□□□ 0.09
TPM1-215ENST00000558868 ICAM1P05362 532 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 POLR2MP0CAP2 368 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 VCAM1P19320 739 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 CYP3A7P24462 503 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 IREB2P48200 963 aaKnown RBP15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L24Q0WX57 530 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 KRT26Q7Z3Y9 468 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 PDILTQ8N807 584 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.59■□□□□ 0.09
TPM1-215ENST00000558868 RBM46Q8TBY0 533 aaKnown RBP15.59■□□□□ 0.09
TPM1-215ENST00000558868 DHX58Q96C10 678 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 MTMR9Q96QG7 549 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 TANGO6Q9C0B7 1094 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 DNAJC25Q9H1X3 360 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 TMOD4Q9NZQ9 345 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
TPM1-215ENST00000558868 ZHX2Q9Y6X8 837 aa15.59■□□□□ 0.09
TPM1-215ENST00000558868 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
TPM1-215ENST00000558868 MDM2Q00987 491 aaPredicted RBP15.58■□□□□ 0.08
TPM1-215ENST00000558868 PDIA5Q14554 519 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 TRIML1Q8N9V2 468 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 SMARCE1Q969G3 411 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 BPIFA3Q9BQP9 254 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 CUEDC2Q9H467 287 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 RPAP3Q9H6T3 665 aaPredicted RBP15.58■□□□□ 0.08
TPM1-215ENST00000558868 MAGEF1Q9HAY2 307 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 CBX8Q9HC52 389 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 FBXO28Q9NVF7 368 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 PPP1R9AQ9ULJ8 1098 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 CSADQ9Y600 493 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.08
TPM1-215ENST00000558868 GOLGA6L19H0YKK7 550 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 SLC26A4O43511 780 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 FLOT1O75955 427 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 TDP2O95551 362 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 SREBF1P36956 1147 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 ARHGAP4P98171 946 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 PNOCQ13519 176 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 PNMA8AQ86V59 439 aaPredicted RBP15.57■□□□□ 0.08
TPM1-215ENST00000558868 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 MBOAT7Q96N66 472 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 MAP3K20Q9NYL2 800 aaKnown RBP15.57■□□□□ 0.08
TPM1-215ENST00000558868 DACH1Q9UI36 760 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 CCPG1Q9ULG6 757 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 RABGAP1Q9Y3P9 1069 aa15.57■□□□□ 0.08
TPM1-215ENST00000558868 BECN2A8MW95 431 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 ADM5C9JUS6 153 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 TBX3O15119 743 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 MYL1P05976 194 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 CYP3A4P08684 503 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
TPM1-215ENST00000558868 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
TPM1-215ENST00000558868 STAT6P42226 847 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 TPM4P67936 248 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 E2F4Q16254 413 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 NT5DC1Q5TFE4 455 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
TPM1-215ENST00000558868 SH3RF1Q7Z6J0 888 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 CABP7Q86V35 215 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 SLFN12Q8IYM2 578 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 CALML4Q96GE6 196 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 PAGE5Q96GU1 130 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 SLC38A10Q9HBR0 1119 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 DISC1Q9NRI5 854 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 PCDHA5Q9Y5H7 936 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 STK24Q9Y6E0 443 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 SCN4AP35499 1836 aa15.56■□□□□ 0.08
TPM1-215ENST00000558868 POLR2AP24928 1970 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 243.2 ms