RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 IGF2BP3O00425 579 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 NDUFA10O95299 355 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 KRT10P13645 584 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CCNHP51946 323 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 STAT2P52630 851 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ARHGEF18Q6ZSZ5 1173 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 APOBEC2Q9Y235 224 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SYF2O95926 243 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 LSP1P33241 339 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CUL1Q13616 776 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 KCTD6Q8NC69 237 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF473Q8WTR7 871 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HPCAL4Q9UM19 191 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HYOU1Q9Y4L1 999 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 GOLGA8IPA6NC78 632 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 EIF3BP55884 814 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ZBED6P86452 979 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PAG1Q9NWQ8 432 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NVLO15381 856 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SPAG7O75391 227 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ZCCHC18P0CG32 403 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HSPA8P11142 646 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MX2P20592 715 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SEL1L2Q5TEA6 688 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PLA2G4DQ86XP0 818 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MAGEB6Q8N7X4 407 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SPATA4Q8NEY3 305 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 KRT82Q9NSB4 513 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PDP2Q9P2J9 529 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ATP6V0A2Q9Y487 856 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 RTL1A6NKG5 1358 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 EIF3HO15372 352 aaKnown RBP eCLIP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 IL10P22301 178 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 VSNL1P62760 191 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CNNM4Q6P4Q7 775 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 DACT3Q96B18 629 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CHP1Q99653 195 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ZMYND12Q9H0C1 365 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CCDC125Q86Z20 511 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HNRNPLLQ8WVV9 542 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TMEM232C9JQI7 657 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ABCD1P33897 745 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TECP42680 631 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ARHGDIAP52565 204 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TRPM8Q7Z2W7 1104 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CYTH2Q99418 400 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HEMGNQ9BXL5 484 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CCPG1Q9ULG6 757 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CORO1CQ9ULV4 474 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PHLPP2Q6ZVD8 1323 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 B4E1Z4 1266 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NCK2O43639 380 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 GNA14O95837 355 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 APOA1P02647 267 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 GPHNQ9NQX3 736 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SCHIP1Q9P0W5 487 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 STX18Q9P2W9 335 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TSPY2A6NKD2 308 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 DDIT3P35638 169 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 IL1RL1Q01638 556 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 LRRC14Q15048 493 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ICA1LQ8NDH6 482 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TTC41PQ6P2S7 1318 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 IKBKBO14920 756 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SPARCL1Q14515 664 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 KAZNQ674X7 775 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ZCWPW2Q504Y3 356 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 C2CD2Q9Y426 696 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TTC38Q5R3I4 469 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SARM1Q6SZW1 724 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM42Q8IWZ5 723 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NUDT16Q96DE0 195 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CDHR1Q96JP9 859 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 LMNB1P20700 586 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 INPP1P49441 399 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 HDLBPQ00341 1268 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 WASHC5Q12768 1159 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PTGISQ16647 500 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 RINLQ6ZS11 566 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NME9Q86XW9 330 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NAF1Q96HR8 494 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 SH3GL2Q99962 352 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 LINC00854A0A1B0GVQ3 168 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MARK3P27448 753 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PTGDRQ13258 359 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PIGOQ8TEQ8 1089 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PRMT1Q99873 361 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 POLD4Q9HCU8 107 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 TOM1L1O75674 476 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 FTLP02792 175 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 ST13P50502 369 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 NAPAP54920 295 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 CMTR1Q8N1G2 835 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MAGEA13PA6NCF6 341 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 MTHFSDQ2M296 383 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 PYROXD1Q8WU10 500 aa4.01□□□□□ -1.77
ATXN3-248ENST00000558190 GFM2Q969S9 779 aaKnown RBP4.01□□□□□ -1.77
ATXN3-248ENST00000558190 KCNA4P22459 653 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms