RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CTTNBP2NLQ9P2B4 639 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 LARSQ9P2J5 1176 aaKnown RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 CYB5R4Q7L1T6 521 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 CEP95Q96GE4 821 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 ZNF215Q9UL58 517 aaPredicted RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 TMEM191BP0C7N4 346 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 ATF7P17544 494 aaPredicted RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 RASA3Q14644 834 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 SFMBT2Q5VUG0 894 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 MST1RQ04912 1400 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 YWHAEP62258 255 aaKnown RBP19.15■□□□□ 0.66
PTPN21-208ENST00000556564 RIPOR2Q9Y4F9 1068 aa19.15■□□□□ 0.66
PTPN21-208ENST00000556564 KLHL30Q0D2K2 578 aa19.14■□□□□ 0.66
PTPN21-208ENST00000556564 SCARF1Q14162 830 aa19.14■□□□□ 0.66
PTPN21-208ENST00000556564 SYT10Q6XYQ8 523 aa19.14■□□□□ 0.66
PTPN21-208ENST00000556564 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.66
PTPN21-208ENST00000556564 MTUS1Q9ULD2 1270 aa19.14■□□□□ 0.66
PTPN21-208ENST00000556564 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 CDHR1Q96JP9 859 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 LMBRD1Q9NUN5 540 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 ATP2A1O14983 1001 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 MTX1Q13505 466 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 KCNJ12Q14500 433 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 KRBA2Q6ZNG9 492 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 RRAGAQ7L523 313 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 WDR11Q9BZH6 1224 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 GJA10Q969M2 543 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 KMT5AQ9NQR1 393 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 PSMD14O00487 310 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 NTSR2O95665 410 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 PIK3CAP42336 1068 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 BMS1Q14692 1282 aaKnown RBP19.14■□□□□ 0.65
PTPN21-208ENST00000556564 IFT81Q8WYA0 676 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 TTC14Q96N46 770 aa19.14■□□□□ 0.65
PTPN21-208ENST00000556564 LAD1O00515 517 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 GTPBP6O43824 516 aaPredicted RBP19.13■□□□□ 0.65
PTPN21-208ENST00000556564 PSAPP07602 524 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 CMA1P23946 247 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 ATG9AQ7Z3C6 839 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 GOLGA5Q8TBA6 731 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 ERICH4A6NGS2 130 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 E7EVH7 732 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 HNRNPDLO14979 420 aaKnown RBP19.13■□□□□ 0.65
PTPN21-208ENST00000556564 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
PTPN21-208ENST00000556564 CEP112Q8N8E3 955 aa19.13■□□□□ 0.65
PTPN21-208ENST00000556564 LARP4BQ92615 738 aaKnown RBP19.13■□□□□ 0.65
PTPN21-208ENST00000556564 USP42Q9H9J4 1324 aaKnown RBP19.13■□□□□ 0.65
PTPN21-208ENST00000556564 SHTN1A0MZ66 631 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 CHAMP1Q96JM3 812 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 IQCGQ9H095 443 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 FAM26FQ5R3K3 315 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 TYW1BQ6NUM6 668 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 ZBTB33Q86T24 672 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 PLA2G12BQ9BX93 195 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 CD2APQ9Y5K6 639 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 SMIM23A6NLE4 172 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 GAS8O95995 478 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 ADAM9Q13443 819 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 PRAMEF18Q5VWM3 479 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 LARGE1O95461 756 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 TRIM28Q13263 835 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 STYK1Q6J9G0 422 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 CCDC63Q8NA47 563 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 GCFC2P16383 781 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 ZSCAN20P17040 1043 aaPredicted RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 STRIP1Q5VSL9 837 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 PDXDC2PQ6P474 469 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 INTS5Q6P9B9 1019 aaKnown RBP19.12■□□□□ 0.65
PTPN21-208ENST00000556564 KIAA1468Q9P260 1216 aa19.12■□□□□ 0.65
PTPN21-208ENST00000556564 CTTNQ14247 550 aaKnown RBP19.11■□□□□ 0.65
PTPN21-208ENST00000556564 PPP2R5AQ15172 486 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 TLR3O15455 904 aaKnown RBP19.11■□□□□ 0.65
PTPN21-208ENST00000556564 MMP19Q99542 508 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 C1orf112Q9NSG2 853 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 DCCP43146 1447 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 CDC25AP30304 524 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 TRAPPC10P48553 1259 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 RNASELQ05823 741 aaKnown RBP19.11■□□□□ 0.65
PTPN21-208ENST00000556564 NECTIN1Q15223 517 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 KMT5BQ4FZB7 885 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 DGKHQ86XP1 1220 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 NCOA3Q9Y6Q9 1424 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 ABCB11O95342 1321 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 RSBN1LQ6PCB5 846 aaPredicted RBP19.11■□□□□ 0.65
PTPN21-208ENST00000556564 PCDHA6Q9UN73 950 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 PCDHA8Q9Y5H6 950 aa19.11■□□□□ 0.65
PTPN21-208ENST00000556564 LRRC41Q15345 812 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 ARMCX3Q9UH62 379 aaPredicted RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 FAM169AQ9Y6X4 670 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 V9GYY5 206 aaPredicted RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 ZNF75DP51815 510 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms