RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 USH1GQ495M9 461 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 IFIT1BQ5T764 474 aaKnown RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 PSRC1Q6PGN9 363 aaPredicted RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 RALYLQ86SE5 291 aaKnown RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 FBXO16Q8IX29 292 aaPredicted RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
PNN-203ENST00000554117 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 MYO9BQ13459 2157 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 TMEM265A0A087WTH1 108 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
PNN-203ENST00000554117 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
PNN-203ENST00000554117 B4E1Z4 1266 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 KPNA6O60684 536 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 IGHDP01880 384 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 BEX3Q00994 111 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 DUSP28Q4G0W2 176 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 SCFD2Q8WU76 684 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
PNN-203ENST00000554117 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
PNN-203ENST00000554117 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
PNN-203ENST00000554117 TNKSO95271 1327 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 NEDD4P46934 1319 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 SZT2Q5T011 3432 aa12.55□□□□□ -0.4
PNN-203ENST00000554117 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.54□□□□□ -0.4
PNN-203ENST00000554117 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 NFIBO00712 420 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 CDC37Q16543 378 aaPredicted RBP12.54□□□□□ -0.4
PNN-203ENST00000554117 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
PNN-203ENST00000554117 CXCL17Q6UXB2 119 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
PNN-203ENST00000554117 FGD4Q96M96 766 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 GNEQ9Y223 722 aaKnown RBP12.54□□□□□ -0.4
PNN-203ENST00000554117 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
PNN-203ENST00000554117 MYL3P08590 195 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 SMPD1P17405 629 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
PNN-203ENST00000554117 NKX3-2P78367 333 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 FBXO11Q86XK2 927 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 FAM126BQ8IXS8 530 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 HIPK3Q9H422 1215 aa12.53□□□□□ -0.4
PNN-203ENST00000554117 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
PNN-203ENST00000554117 LOXHD1Q8IVV2 1947 aa12.52□□□□□ -0.4
PNN-203ENST00000554117 ADCY6O43306 1168 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 TXNP10599 105 aaKnown RBP12.52□□□□□ -0.41
PNN-203ENST00000554117 CDK7P50613 346 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 STXBP2Q15833 593 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 SLC30A10Q6XR72 485 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 NSUN6Q8TEA1 469 aaKnown RBP12.52□□□□□ -0.41
PNN-203ENST00000554117 MTG1Q9BT17 334 aaPredicted RBP12.52□□□□□ -0.41
PNN-203ENST00000554117 AMNQ9BXJ7 453 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 MSRAQ9UJ68 235 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 TBX21Q9UL17 535 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 NLRC5Q86WI3 1866 aa12.52□□□□□ -0.41
PNN-203ENST00000554117 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
PNN-203ENST00000554117 DLL1O00548 723 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 FGBP02675 491 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 ACTN1P12814 892 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 FOSL2P15408 326 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 SAMD3Q8N6K7 520 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
PNN-203ENST00000554117 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 ANKS1AQ92625 1134 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 IWS1Q96ST2 819 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
PNN-203ENST00000554117 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 PDGFCQ9NRA1 345 aa12.51□□□□□ -0.41
PNN-203ENST00000554117 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
PNN-203ENST00000554117 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
PNN-203ENST00000554117 CFBP00751 764 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 CD4P01730 458 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms