RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 ZEB2O60315 1214 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 CABYRO75952 493 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 TIMP1P01033 207 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 UBA5Q9GZZ9 404 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 STXBP5LQ9Y2K9 1186 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 LRRC37A2A6NM11 1700 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 TNKSO95271 1327 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 RAD50Q92878 1312 aa20.54■□□□□ 0.88
SDR39U1-206ENST00000553930 PTGS1P23219 599 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 EPHB4P54760 987 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 ASPRV1Q53RT3 343 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 FAM126BQ8IXS8 530 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 CPVLQ9H3G5 476 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 TLR3O15455 904 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 USH1GQ495M9 461 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 DUSP28Q4G0W2 176 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 TMEM63BQ5T3F8 832 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 SLC43A3Q8NBI5 491 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 RGS22Q8NE09 1264 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 DNERQ8NFT8 737 aa20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 MPHOSPH6Q99547 160 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-206ENST00000553930 LCTP09848 1927 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 SMAD3P84022 425 aaKnown RBP20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 ITGA7Q13683 1181 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 ZNF697Q5TEC3 545 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 MFSD5Q6N075 450 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 ADGRF4Q8IZF3 695 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 RUFY2Q8WXA3 655 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 RNPC3Q96LT9 517 aaKnown RBP20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 SEZ6LQ9BYH1 1024 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 WDR11Q9BZH6 1224 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 MAF1Q9H063 256 aa20.52■□□□□ 0.87
SDR39U1-206ENST00000553930 RBM47A0AV96 593 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 CD4P01730 458 aa20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 PARP1P09874 1014 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 EDNRBP24530 442 aa20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 PDE4DQ08499 809 aa20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 SLC17A8Q8NDX2 589 aa20.51■□□□□ 0.87
SDR39U1-206ENST00000553930 EYSQ5T1H1 3165 aa20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 ABCB11O95342 1321 aa20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 B4DLN1 442 aa20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 CHMLP26374 656 aa20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 MRPL12P52815 198 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 FAM161BQ96MY7 647 aa20.5■□□□□ 0.87
SDR39U1-206ENST00000553930 CDH23Q9H251 3354 aa20.49■□□□□ 0.87
SDR39U1-206ENST00000553930 GRIN2DO15399 1336 aa20.49■□□□□ 0.87
SDR39U1-206ENST00000553930 TRDNQ13061 729 aa20.49■□□□□ 0.87
SDR39U1-206ENST00000553930 PPIGQ13427 754 aaKnown RBP eCLIP20.49■□□□□ 0.873e-7■■■□□ 16.1
SDR39U1-206ENST00000553930 TMEM199Q8N511 208 aa20.49■□□□□ 0.87
SDR39U1-206ENST00000553930 GUCD1Q96NT3 240 aa20.49■□□□□ 0.87
SDR39U1-206ENST00000553930 UNC80Q8N2C7 3258 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 NKRFO15226 690 aaKnown RBP eCLIP20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 CPT1AP50416 773 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 PPP2R5BQ15173 497 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 SEC23AQ15436 765 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 QRICH1Q2TAL8 776 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 CYB5R4Q7L1T6 521 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 SCFD2Q8WU76 684 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 JMJD4Q9H9V9 463 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 POLR3EQ9NVU0 708 aa20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
SDR39U1-206ENST00000553930 PSMC6P62333 389 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 PTH1RQ03431 593 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 FBXO11Q86XK2 927 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
SDR39U1-206ENST00000553930 CYP21A2P08686 494 aa20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 CSF2RAP15509 400 aa20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 STAG2Q8N3U4 1231 aa20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 TBC1D5Q92609 795 aa20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.46■□□□□ 0.871e-10■□□□□ 10
SDR39U1-206ENST00000553930 SEMA6BQ9H3T3 888 aa20.46■□□□□ 0.87
SDR39U1-206ENST00000553930 SGSM2O43147 1006 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 B4GALT4O60513 344 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 CYP2C18P33260 490 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 PURAQ00577 322 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 BRDTQ58F21 947 aaPredicted RBP20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 C16orf59Q7L2K0 433 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 NSUN6Q8TEA1 469 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 TRPV6Q9H1D0 765 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 HIPK3Q9H422 1215 aa20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 GPHNQ9NQX3 736 aaPredicted RBP20.45■□□□□ 0.86
SDR39U1-206ENST00000553930 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 KLRF2D3W0D1 207 aa20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 MYL3P08590 195 aa20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 TXNP10599 105 aaKnown RBP20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 TTLL4Q14679 1199 aa20.44■□□□□ 0.86
SDR39U1-206ENST00000553930 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms