RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
XRCC1-202ENST00000543982 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
XRCC1-202ENST00000543982 ATP2A1O14983 1001 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 STAT3P40763 770 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 NONOQ15233 471 aaKnown RBP eCLIP18.21■□□□□ 0.5
XRCC1-202ENST00000543982 ATL3Q6DD88 541 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 C4orf32Q8N8J7 132 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.5
XRCC1-202ENST00000543982 SCAND2PQ9GZW5 306 aaPredicted RBP18.21■□□□□ 0.5
XRCC1-202ENST00000543982 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.5
XRCC1-202ENST00000543982 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
XRCC1-202ENST00000543982 SLC10A3P09131 477 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 FDX1P10109 184 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 MCM7P33993 719 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 GSE1Q14687 1217 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 RNF146Q9NTX7 359 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 PCDHA7Q9UN72 937 aa18.2■□□□□ 0.5
XRCC1-202ENST00000543982 TESPA1A2RU30 521 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-202ENST00000543982 SLC30A10Q6XR72 485 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 CRYGNQ8WXF5 182 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 ANO3Q9BYT9 981 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 TMEM60Q9H2L4 133 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-202ENST00000543982 SPTLC2O15270 562 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 TDP2O95551 362 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 YEATS4O95619 227 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 MBD3O95983 291 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 OSBPP22059 807 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 HSD17B4P51659 736 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 OAZ1P54368 228 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 STK38Q15208 465 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 IL17AQ16552 155 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 LETM2Q2VYF4 491 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 ANKRD23Q86SG2 305 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 ZFP91Q96JP5 570 aaPredicted RBP18.19■□□□□ 0.5
XRCC1-202ENST00000543982 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
XRCC1-202ENST00000543982 UBXN2AP68543 259 aa18.18■□□□□ 0.5
XRCC1-202ENST00000543982 FSTL1Q12841 308 aa18.18■□□□□ 0.5
XRCC1-202ENST00000543982 AXDND1Q5T1B0 1012 aaPredicted RBP18.18■□□□□ 0.5
XRCC1-202ENST00000543982 CYP4F22Q6NT55 531 aa18.18■□□□□ 0.5
XRCC1-202ENST00000543982 SPATC1LQ9H0A9 340 aa18.18■□□□□ 0.5
XRCC1-202ENST00000543982 ELP1O95163 1332 aa18.18■□□□□ 0.5
XRCC1-202ENST00000543982 TRAPPC10P48553 1259 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 GRM1Q13255 1194 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 PTGDRQ13258 359 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 NEK8Q86SG6 692 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 SYTL5Q8TDW5 730 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 UIMC1Q96RL1 719 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 GZF1Q9H116 711 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 NOL7Q9UMY1 257 aaKnown RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 SLC37A4O43826 429 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 GHRHRQ02643 423 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
XRCC1-202ENST00000543982 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 GLT8D2Q9H1C3 349 aa18.17■□□□□ 0.5
XRCC1-202ENST00000543982 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
XRCC1-202ENST00000543982 ME1P48163 572 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 UBE2HP62256 183 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 HTRA3P83110 453 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 TRAF1Q13077 416 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 CYP2W1Q8TAV3 490 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 GJA10Q969M2 543 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 GOLPH3LQ9H4A5 285 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 FBXO2Q9UK22 296 aaPredicted RBP18.16■□□□□ 0.5
XRCC1-202ENST00000543982 MYH15Q9Y2K3 1946 aa18.16■□□□□ 0.5
XRCC1-202ENST00000543982 LIG1P18858 919 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 PABPC4Q13310 644 aaKnown RBP eCLIP18.15■□□□□ 0.57e-6■■□□□ 14.2
XRCC1-202ENST00000543982 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 SPECC1Q5M775 1068 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 IL31RAQ8NI17 732 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 A1CFQ9NQ94 594 aaKnown RBP18.15■□□□□ 0.5
XRCC1-202ENST00000543982 SLC45A1Q9Y2W3 748 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 RABGAP1Q9Y3P9 1069 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 SREBF1P36956 1147 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 ARHGAP4P98171 946 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 PORCNQ9H237 461 aa18.15■□□□□ 0.5
XRCC1-202ENST00000543982 SPDYE3A6NKU9 549 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 ERCC3P19447 782 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 ATP2C1P98194 919 aaPredicted RBP18.14■□□□□ 0.49
XRCC1-202ENST00000543982 RNF207Q6ZRF8 634 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 USP49Q70CQ1 688 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 KCNG4Q8TDN1 519 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 CYP39A1Q9NYL5 469 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 A0A0G2JMZ2 1700 aa18.14■□□□□ 0.49
XRCC1-202ENST00000543982 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
XRCC1-202ENST00000543982 FAM86B1E9PN63 330 aa18.13■□□□□ 0.49
XRCC1-202ENST00000543982 AOC2O75106 756 aa18.13■□□□□ 0.49
XRCC1-202ENST00000543982 PPP6R2O75170 966 aa18.13■□□□□ 0.49
XRCC1-202ENST00000543982 FAM86B2P0C5J1 330 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms