RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 DDX4Q9NQI0 724 aaKnown RBP8.72□□□□□ -1.01
LRP6-206ENST00000543091 BARHL2Q9NY43 387 aa8.72□□□□□ -1.01
LRP6-206ENST00000543091 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
LRP6-206ENST00000543091 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.71□□□□□ -1.01
LRP6-206ENST00000543091 PFASO15067 1338 aa8.71□□□□□ -1.01
LRP6-206ENST00000543091 PTGDRQ13258 359 aa8.71□□□□□ -1.01
LRP6-206ENST00000543091 DEFB115Q30KQ5 88 aa8.71□□□□□ -1.01
LRP6-206ENST00000543091 ZBTB8OSQ8IWT0 167 aa8.71□□□□□ -1.01
LRP6-206ENST00000543091 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.71□□□□□ -1.01
LRP6-206ENST00000543091 GRPEL1Q9HAV7 217 aa8.71□□□□□ -1.01
LRP6-206ENST00000543091 SPDYE4A6NLX3 237 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 TBC1D12O60347 775 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 TECP42680 631 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.02
LRP6-206ENST00000543091 NOGQ13253 232 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 FAM198AQ9UFP1 575 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 SYNPO2Q9UMS6 1093 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 A0A1B0GVL5 298 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 SHMT1P34896 483 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 KIF23Q02241 960 aaPredicted RBP8.71□□□□□ -1.02
LRP6-206ENST00000543091 PPIL2Q13356 520 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 ZFYVE27Q5T4F4 411 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 CACNA2D4Q7Z3S7 1137 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 UIMC1Q96RL1 719 aa8.71□□□□□ -1.02
LRP6-206ENST00000543091 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.02
LRP6-206ENST00000543091 PSAPP07602 524 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 TTBK2Q6IQ55 1244 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 RGMBQ6NW40 437 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 VPS36Q86VN1 386 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 METTL13Q8N6R0 699 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 RETREG2Q8NC44 543 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 ATG4CQ96DT6 458 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 TBC1D22BQ9NU19 505 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 MARF1Q9Y4F3 1742 aaKnown RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 POLR2DO15514 142 aaKnown RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 GRIK5Q16478 980 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 HERC4Q5GLZ8 1057 aaPredicted RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 GMCL1P1Q8NEA9 526 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 DEPTORQ8TB45 409 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 LARSQ9P2J5 1176 aaKnown RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 ZNF165P49910 485 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 SLC7A3Q8WY07 619 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 PGBD1Q96JS3 809 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 TMEM106CQ9BVX2 250 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 MROH8Q9H579 483 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 LAMB4A4D0S4 1761 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 TMEM88BA6NKF7 163 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 DTNBO60941 627 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 MAPK4P31152 587 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 POLGP54098 1239 aaPredicted RBP8.7□□□□□ -1.02
LRP6-206ENST00000543091 MTMR1Q13613 665 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 USP28Q96RU2 1077 aa8.7□□□□□ -1.02
LRP6-206ENST00000543091 KIF4AO95239 1232 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 JAK3P52333 1124 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ARHGAP4P98171 946 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 PPP2R5AQ15172 486 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ADALQ6DHV7 355 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 MYCT1Q8N699 235 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 FAM167AQ96KS9 214 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.69□□□□□ -1.02
LRP6-206ENST00000543091 NRAPQ86VF7 1730 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 CDC27P30260 824 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 KRT76Q01546 638 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 NR5A1Q13285 461 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 TFDP1Q14186 410 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ISM2Q6H9L7 571 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 REM2Q8IYK8 340 aaPredicted RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 SAMD3Q8N6K7 520 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 DRC1Q96MC2 740 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 TTC12Q9H892 705 aaPredicted RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 MAGEF1Q9HAY2 307 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 RIC8AQ9NPQ8 531 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 SEPT11Q9NVA2 429 aaKnown RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 SORBS3O60504 671 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 VCAM1P19320 739 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 VGLL4Q14135 290 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 SRBD1Q8N5C6 995 aaKnown RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 FAM20AQ96MK3 541 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 NACC1Q96RE7 527 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 CUEDC2Q9H467 287 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 SUGCTQ9HAC7 445 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 PPP1R9AQ9ULJ8 1098 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ITGB4P16144 1822 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 LARGE1O95461 756 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 GNAT1P11488 350 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ANTXR2P58335 489 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 BAATQ14032 418 aaPredicted RBP8.69□□□□□ -1.02
LRP6-206ENST00000543091 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 NMRK2Q9NPI5 230 aa8.69□□□□□ -1.02
LRP6-206ENST00000543091 FRMD4BQ9Y2L6 1034 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms