RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 HPS3Q969F9 1004 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 DHTKD1Q96HY7 919 aaPredicted RBP23.48■■□□□ 1.35
LSM14A-202ENST00000540746 RIC8AQ9NPQ8 531 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 LGALS16A8MUM7 142 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 G3V3G9 751 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 TADA3O75528 432 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 ATP2B2Q01814 1243 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 DCAF8Q5TAQ9 597 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 MB21D1Q8N884 522 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 PNMA5Q96PV4 448 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 LRWD1Q9UFC0 647 aa23.48■■□□□ 1.35
LSM14A-202ENST00000540746 DDX41Q9UJV9 622 aaKnown RBP23.48■■□□□ 1.35
LSM14A-202ENST00000540746 FAM196BA6NMK8 535 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 USP17L10C9JJH3 530 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 TPM1P09493 284 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 H2AFXP16104 143 aaPredicted RBP23.47■■□□□ 1.35
LSM14A-202ENST00000540746 CLK2P49760 499 aaKnown RBP23.47■■□□□ 1.35
LSM14A-202ENST00000540746 CALML4Q96GE6 196 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 EXOC1Q9NV70 894 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 POTEMA6NI47 508 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 HLA-DOAP06340 250 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 KRT9P35527 623 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 TNNI2P48788 182 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 MSL1Q68DK7 614 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 ANKRD40Q6AI12 368 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 KIAA0825Q8IV33 1275 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 ACRBPQ8NEB7 543 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 NUDT12Q9BQG2 462 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 MRFAP1Q9Y605 127 aa23.47■■□□□ 1.35
LSM14A-202ENST00000540746 ABL1P00519 1130 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 TRIM14Q14142 442 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 CCDC96Q2M329 555 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 ARHGAP29Q52LW3 1261 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 TMTC1Q8IUR5 882 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 CSGALNACT2Q8N6G5 542 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 KIAA0895Q8NCT3 520 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 P2RX5Q93086 422 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 ZNF622Q969S3 477 aaKnown RBP eCLIP23.46■■□□□ 1.359e-9■□□□□ 10.9
LSM14A-202ENST00000540746 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 EHD4Q9H223 541 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 ZNF446Q9NWS9 450 aa23.46■■□□□ 1.35
LSM14A-202ENST00000540746 TTC26A0AVF1 554 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 PLSCR1O15162 318 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 CCNE1P24864 410 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 TCP10Q12799 353 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 GPATCH4Q5T3I0 446 aaKnown RBP23.45■■□□□ 1.35
LSM14A-202ENST00000540746 PPP1R18Q6NYC8 613 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 PODNQ7Z5L7 613 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 MNS1Q8NEH6 495 aa23.45■■□□□ 1.35
LSM14A-202ENST00000540746 DDTLA6NHG4 134 aaPredicted RBP23.45■■□□□ 1.34
LSM14A-202ENST00000540746 MYMKA6NI61 221 aa23.45■■□□□ 1.34
LSM14A-202ENST00000540746 ZBTB5O15062 677 aa23.45■■□□□ 1.34
LSM14A-202ENST00000540746 MCM6Q14566 821 aa23.45■■□□□ 1.34
LSM14A-202ENST00000540746 ZNF646O15015 1829 aaPredicted RBP23.45■■□□□ 1.34
LSM14A-202ENST00000540746 A0A1W2PQC6 194 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 NKRFO15226 690 aaKnown RBP eCLIP23.44■■□□□ 1.34
LSM14A-202ENST00000540746 AMPD3Q01432 767 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 CHP1Q99653 195 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 OGFRQ9NZT2 677 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 APBA3O96018 575 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 CYP26C1Q6V0L0 522 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 SH3BP5LQ7L8J4 393 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 UBXN4Q92575 508 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 GJA10Q969M2 543 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 FAM198AQ9UFP1 575 aa23.44■■□□□ 1.34
LSM14A-202ENST00000540746 EFCAB8A8MWE9 144 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 B4DLN1 442 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 PDIA5Q14554 519 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 PPP4R3AQ6IN85 833 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 SV2BQ7L1I2 683 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 KCNK18Q7Z418 384 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 HAS1Q92839 578 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 CCDC47Q96A33 483 aaKnown RBP23.43■■□□□ 1.34
LSM14A-202ENST00000540746 TUBGCP2Q9BSJ2 902 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 TMX4Q9H1E5 349 aaPredicted RBP23.43■■□□□ 1.34
LSM14A-202ENST00000540746 SLX4Q8IY92 1834 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 ARFGEF1Q9Y6D6 1849 aa23.43■■□□□ 1.34
LSM14A-202ENST00000540746 PES1O00541 588 aaKnown RBP23.42■■□□□ 1.34
LSM14A-202ENST00000540746 TMEM266Q2M3C6 531 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 DACT2Q5SW24 774 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 NOC3LQ8WTT2 800 aaKnown RBP23.42■■□□□ 1.34
LSM14A-202ENST00000540746 LARP4BQ92615 738 aaKnown RBP23.42■■□□□ 1.34
LSM14A-202ENST00000540746 CUL5Q93034 780 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 CCDC17Q96LX7 622 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 SLC39A2Q9NP94 309 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 STK17AQ9UEE5 414 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 SEMA6BQ9H3T3 888 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
LSM14A-202ENST00000540746 MAGEC2Q9UBF1 373 aaPredicted RBP23.42■■□□□ 1.34
LSM14A-202ENST00000540746 BICDL2A1A5D9 508 aa23.41■■□□□ 1.34
LSM14A-202ENST00000540746 EEF2P13639 858 aaKnown RBP23.41■■□□□ 1.34
LSM14A-202ENST00000540746 PRKCSHP14314 528 aaPredicted RBP23.41■■□□□ 1.34
LSM14A-202ENST00000540746 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
LSM14A-202ENST00000540746 ECM1Q16610 540 aa23.41■■□□□ 1.34
LSM14A-202ENST00000540746 COBLL1Q53SF7 1204 aa23.41■■□□□ 1.34
LSM14A-202ENST00000540746 CNNM4Q6P4Q7 775 aa23.41■■□□□ 1.34
LSM14A-202ENST00000540746 SIAH1Q8IUQ4 282 aa23.41■■□□□ 1.34
LSM14A-202ENST00000540746 CNOT6LQ96LI5 555 aaKnown RBP23.41■■□□□ 1.34
LSM14A-202ENST00000540746 DNAJC7Q99615 494 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms