RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ANGEL2Q5VTE6 544 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 CAVIN1Q6NZI2 390 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 LRSAM1Q6UWE0 723 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 DPF2Q92785 391 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 ALDH8A1Q9H2A2 487 aaPredicted RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX55-206ENST00000539934 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 CCDC194A0A1B0GVG4 234 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 UBE4AQ14139 1066 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 UBE3CQ15386 1083 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 ARHGAP22Q7Z5H3 698 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 RASAL3Q86YV0 1011 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 SMYD1Q8NB12 490 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 SPC24Q8NBT2 197 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 SLC35B4Q969S0 331 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 TPCN1Q9ULQ1 816 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 MINPP1Q9UNW1 487 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 KIAA0100Q14667 2235 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 COL6A3P12111 3177 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 ZNF532Q9HCE3 1301 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 UBE2Q2LH0YL09 131 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 ZNF189O75820 626 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 H2AFXP16104 143 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 PDE6AP16499 860 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 REXO1L1PQ8IX06 675 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 SCN9AQ15858 1988 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 EIF3FO00303 357 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 CHUKO15111 745 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 ERLIN2O94905 339 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 FESP07332 822 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 PNMA6AP0CW24 399 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 PDE4BQ07343 736 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 PABPC4Q13310 644 aaKnown RBP eCLIP14.06□□□□□ -0.16
DDX55-206ENST00000539934 TOB2Q14106 344 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 IMMTQ16891 758 aaKnown RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 PEX5LQ8IYB4 626 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 NECAB1Q8N987 351 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 SPDYE1Q8NFV5 336 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 OR8K1Q8NGG5 319 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 GTF3C6Q969F1 213 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
DDX55-206ENST00000539934 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
DDX55-206ENST00000539934 E7EWF7 191 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 PRKG1Q13976 671 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 CAVIN4Q5BKX8 364 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 SEPT14Q6ZU15 432 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 Q6ZUG5 572 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 ANKK1Q8NFD2 765 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 CCDC114Q96M63 670 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 MTRQ99707 1265 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 EPAS1Q99814 870 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 R3HDMLQ9H3Y0 253 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
DDX55-206ENST00000539934 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
DDX55-206ENST00000539934 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 SPDYE3A6NKU9 549 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 TMEM110-MUSTN1A8MSY1 372 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 FGAP02671 866 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 CA8P35219 290 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 GYG1P46976 350 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 CCDC92Q53HC0 331 aaPredicted RBP14.05□□□□□ -0.16
DDX55-206ENST00000539934 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 ERO1AQ96HE7 468 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 IFT122Q9HBG6 1241 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 BATF3Q9NR55 127 aa14.05□□□□□ -0.16
DDX55-206ENST00000539934 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 WTIPA6NIX2 430 aaPredicted RBP14.04□□□□□ -0.16
DDX55-206ENST00000539934 GJB2P29033 226 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 HAND2P61296 217 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 DHX32Q7L7V1 743 aaKnown RBP14.04□□□□□ -0.16
DDX55-206ENST00000539934 MPP4Q96JB8 637 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 BRD8Q9H0E9 1235 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 HDAC6Q9UBN7 1215 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
DDX55-206ENST00000539934 G3V3G9 751 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 FOXP2O15409 715 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 HDAC4P56524 1084 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 SLC43A3Q8NBI5 491 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 GABPB2Q8TAK5 448 aaPredicted RBP14.03□□□□□ -0.16
DDX55-206ENST00000539934 TBC1D16Q8TBP0 767 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 KAT2BQ92831 832 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 VTI1AQ96AJ9 217 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 ANKRD2Q9GZV1 360 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 UBAP1Q9NZ09 502 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 TCRBV5S4A2TA0A5A2 114 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 MTRF1O75570 445 aaKnown RBP14.03□□□□□ -0.16
DDX55-206ENST00000539934 VIL1P09327 827 aaKnown RBP14.03□□□□□ -0.16
DDX55-206ENST00000539934 USP11P51784 963 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms