RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 SYKP43405 635 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 BPIFB4P59827 614 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 LACTBP83111 547 aaPredicted RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 ATP11AP98196 1134 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 ODF2Q5BJF6 829 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 FAM133BQ5BKY9 247 aaKnown RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 JADE2Q9NQC1 790 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 hCG_1642624A0A1W2PR95 340 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 RNMTO43148 476 aaKnown RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 APBB1IPQ7Z5R6 666 aaPredicted RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 LONP2Q86WA8 852 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 SMYD1Q8NB12 490 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 CORO1BQ9BR76 489 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 TRIM10Q9UDY6 481 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 DBNLQ9UJU6 430 aaKnown RBP12.08□□□□□ -0.48
DDX11-213ENST00000539049 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 GMEB1Q9Y692 573 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.48
DDX11-213ENST00000539049 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 CASP14P31944 242 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 BICDL1Q6ZP65 573 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 ATP11CQ8NB49 1132 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 SLC35B4Q969S0 331 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TRAPPC9Q96Q05 1148 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDX11-213ENST00000539049 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 C5orf60A6NFR6 353 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 GOLGA8BA8MQT2 603 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 PHF20L1A8MW92 1017 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 F8VZ95 297 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 ZNF185O15231 689 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 HIP1RO75146 1068 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 GFPT2O94808 682 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 NQO1P15559 274 aaKnown RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 ADCY1Q08828 1119 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 SDR16C5Q8N3Y7 309 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 CAVIN3Q969G5 261 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 TAF1DQ9H5J8 278 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TOPAZ1Q8N9V7 1692 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TMEM221A6NGB7 291 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 PDE2AO00408 941 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 ALOX15P16050 662 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 ZFXP17010 805 aaPredicted RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 SF3A3Q12874 501 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■■■■■ 35.5
DDX11-213ENST00000539049 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
DDX11-213ENST00000539049 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 MLKLQ8NB16 471 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 FBF1Q8TES7 1133 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 RUBCNQ92622 972 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TBC1D7Q9P0N9 293 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
DDX11-213ENST00000539049 TEX33O43247 280 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 CYP21A2P08686 494 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 TMOD1P28289 359 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 KCNJ2P63252 427 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 LRRC24Q50LG9 513 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 IQCKQ8N0W5 287 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 MTA3Q9BTC8 594 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 SLC12A4Q9UP95 1085 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 USP42Q9H9J4 1324 aaKnown RBP12.06□□□□□ -0.48
DDX11-213ENST00000539049 FUT4P22083 530 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 USP46P62068 366 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 PDE4BQ07343 736 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 NR1I3Q14994 352 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 CTNNBL1Q8WYA6 563 aaPredicted RBP12.06□□□□□ -0.48
DDX11-213ENST00000539049 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 DHRS1Q96LJ7 313 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 STIM2Q9P246 746 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 CLIC4Q9Y696 253 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 LRRC37A3O60309 1634 aa12.06□□□□□ -0.48
DDX11-213ENST00000539049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
DDX11-213ENST00000539049 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms