RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 FGRP09769 529 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 CCDC85BQ15834 202 aaPredicted RBP25.18■■□□□ 1.62
SSH3-211ENST00000534112 BTNL9Q6UXG8 535 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 VWCEQ96DN2 955 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 ASB2Q96Q27 587 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 WDR11Q9BZH6 1224 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 THEGQ9P2T0 379 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 SLC4A7Q9Y6M7 1214 aa25.18■■□□□ 1.62
SSH3-211ENST00000534112 RABGGTBP53611 331 aa25.17■■□□□ 1.62
SSH3-211ENST00000534112 SCLYQ96I15 445 aa25.17■■□□□ 1.62
SSH3-211ENST00000534112 NFIBO00712 420 aa25.16■■□□□ 1.62
SSH3-211ENST00000534112 ALDH5A1P51649 535 aaPredicted RBP25.16■■□□□ 1.62
SSH3-211ENST00000534112 ALX1Q15699 326 aa25.16■■□□□ 1.62
SSH3-211ENST00000534112 SYDE2Q5VT97 1194 aa25.16■■□□□ 1.62
SSH3-211ENST00000534112 TRMT13Q9NUP7 481 aaKnown RBP25.16■■□□□ 1.62
SSH3-211ENST00000534112 POLR3EQ9NVU0 708 aa25.16■■□□□ 1.62
SSH3-211ENST00000534112 SALL3Q9BXA9 1300 aa25.15■■□□□ 1.62
SSH3-211ENST00000534112 LOC102724159A0A0B4J2E5 919 aa25.15■■□□□ 1.62
SSH3-211ENST00000534112 SUPT20HL2P0C7V6 817 aa25.15■■□□□ 1.62
SSH3-211ENST00000534112 TOP1P11387 765 aaKnown RBP25.15■■□□□ 1.62
SSH3-211ENST00000534112 PWP2Q15269 919 aaKnown RBP25.15■■□□□ 1.62
SSH3-211ENST00000534112 TMEM47Q9BQJ4 181 aa25.15■■□□□ 1.62
SSH3-211ENST00000534112 TOMM22Q9NS69 142 aa25.15■■□□□ 1.62
SSH3-211ENST00000534112 RBM47A0AV96 593 aaKnown RBP25.14■■□□□ 1.62
SSH3-211ENST00000534112 PTPDC1A2A3K4 754 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 CYP2C9P11712 490 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 MYOGP15173 224 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 MRPS5P82675 430 aaKnown RBP25.14■■□□□ 1.62
SSH3-211ENST00000534112 PURAQ00577 322 aaKnown RBP25.14■■□□□ 1.62
SSH3-211ENST00000534112 EVI5LQ96CN4 794 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 GPCPD1Q9NPB8 672 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 PCDHA11Q9Y5I1 949 aa25.14■■□□□ 1.62
SSH3-211ENST00000534112 TNKSO95271 1327 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 FRMPD2Q68DX3 1309 aaPredicted RBP25.13■■□□□ 1.61
SSH3-211ENST00000534112 ZBBXA8MT70 800 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 MYL3P08590 195 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 CPT1AP50416 773 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 RRP12Q5JTH9 1297 aaKnown RBP25.13■■□□□ 1.61
SSH3-211ENST00000534112 PPP2R2DQ66LE6 453 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 CLEC4DQ8WXI8 215 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 HELLSQ9NRZ9 838 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 TCP11L1Q9NUJ3 509 aa25.13■■□□□ 1.61
SSH3-211ENST00000534112 FGAP02671 866 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 PFKMP08237 780 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 ATP2A2P16615 1042 aaKnown RBP25.12■■□□□ 1.61
SSH3-211ENST00000534112 CALML3P27482 149 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 TTLL4Q14679 1199 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 SLC30A10Q6XR72 485 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 OR6J1Q8NGC5 347 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 MTG1Q9BT17 334 aaPredicted RBP25.12■■□□□ 1.61
SSH3-211ENST00000534112 GPHNQ9NQX3 736 aaPredicted RBP25.12■■□□□ 1.61
SSH3-211ENST00000534112 LRRC37A2A6NM11 1700 aa25.12■■□□□ 1.61
SSH3-211ENST00000534112 ADAMTS19Q8TE59 1207 aa25.11■■□□□ 1.61
SSH3-211ENST00000534112 NCOR1O75376 2440 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 PDHBP11177 359 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 NBPF20Q3BBV1 942 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 ANKRD45Q5TZF3 282 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 RNF207Q6ZRF8 634 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 DEFB128Q7Z7B8 93 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 FAM227BQ96M60 508 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 ZBTB47Q9UFB7 747 aaPredicted RBP25.1■■□□□ 1.61
SSH3-211ENST00000534112 PNMA2Q9UL42 364 aa25.1■■□□□ 1.61
SSH3-211ENST00000534112 RPS6P62753 249 aaKnown RBP25.09■■□□□ 1.61
SSH3-211ENST00000534112 PDE4DQ08499 809 aa25.09■■□□□ 1.61
SSH3-211ENST00000534112 MCMDC2Q4G0Z9 681 aa25.09■■□□□ 1.61
SSH3-211ENST00000534112 BRDTQ58F21 947 aaPredicted RBP25.09■■□□□ 1.61
SSH3-211ENST00000534112 XIRP2A4UGR9 3374 aa25.08■■□□□ 1.61
SSH3-211ENST00000534112 NKRFO15226 690 aaKnown RBP eCLIP25.08■■□□□ 1.61
SSH3-211ENST00000534112 EDNRBP24530 442 aa25.08■■□□□ 1.61
SSH3-211ENST00000534112 ZNF543Q08ER8 600 aa25.08■■□□□ 1.61
SSH3-211ENST00000534112 PPP2R5BQ15173 497 aa25.08■■□□□ 1.61
SSH3-211ENST00000534112 FAM47CQ5HY64 1035 aa25.08■■□□□ 1.61
SSH3-211ENST00000534112 UHRF1Q96T88 793 aaPredicted RBP25.08■■□□□ 1.61
SSH3-211ENST00000534112 LCTP09848 1927 aa25.08■■□□□ 1.6
SSH3-211ENST00000534112 A0A0D9SFI3 127 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 A6NJR5 290 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 KPNA6O60684 536 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 HSPD1P10809 573 aaKnown RBP25.07■■□□□ 1.6
SSH3-211ENST00000534112 PDE1AP54750 535 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 TMEM67Q5HYA8 995 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 NFRKBQ6P4R8 1299 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 MICALL1Q8N3F8 863 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 IL27Q8NEV9 243 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 DNERQ8NFT8 737 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 SCFD2Q8WU76 684 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 PPP1R13LQ8WUF5 828 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 COPS5Q92905 334 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 TTC14Q96N46 770 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 MPHOSPH6Q99547 160 aaKnown RBP25.07■■□□□ 1.6
SSH3-211ENST00000534112 TSPYL2Q9H2G4 693 aaPredicted RBP25.07■■□□□ 1.6
SSH3-211ENST00000534112 RAD50Q92878 1312 aa25.07■■□□□ 1.6
SSH3-211ENST00000534112 ACTN1P12814 892 aa25.06■■□□□ 1.6
SSH3-211ENST00000534112 COL9A1P20849 921 aa25.06■■□□□ 1.6
SSH3-211ENST00000534112 HAND2P61296 217 aa25.06■■□□□ 1.6
SSH3-211ENST00000534112 WDR19Q8NEZ3 1342 aa25.06■■□□□ 1.6
SSH3-211ENST00000534112 PITPNM1O00562 1244 aa25.05■■□□□ 1.6
SSH3-211ENST00000534112 CA3P07451 260 aa25.05■■□□□ 1.6
SSH3-211ENST00000534112 IQCF3P0C7M6 154 aa25.05■■□□□ 1.6
SSH3-211ENST00000534112 SNHG28P0DPA3 235 aa25.05■■□□□ 1.6
SSH3-211ENST00000534112 RFC2P35250 354 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms