RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 SNPHO15079 494 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 CCP110O43303 1012 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 RAD17O75943 681 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 STAT2P52630 851 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 NCAPHQ15003 741 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 CALCRLQ16602 461 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 LETM2Q2VYF4 491 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 COBLL1Q53SF7 1204 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
CHD7-211ENST00000532149 SYDE2Q5VT97 1194 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 PDXDC2PQ6P474 469 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 FOXR2Q6PJQ5 311 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 FBXO11Q86XK2 927 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 RASSF8Q8NHQ8 419 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 NOC3LQ8WTT2 800 aaKnown RBP13.85□□□□□ -0.19
CHD7-211ENST00000532149 LPAR1Q92633 364 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 MTMR9Q96QG7 549 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 MYOZ2Q9NPC6 264 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 KBTBD4Q9NVX7 518 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 FEM1BQ9UK73 627 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 PCDHA1Q9Y5I3 950 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD7-211ENST00000532149 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
CHD7-211ENST00000532149 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
CHD7-211ENST00000532149 OFD1O75665 1012 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 GH2P01242 217 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
CHD7-211ENST00000532149 CAP2P40123 477 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 GRIN1Q05586 938 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 FILIP1LQ4L180 1135 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 KRT79Q5XKE5 535 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 CABP7Q86V35 215 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 PDILTQ8N807 584 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
CHD7-211ENST00000532149 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
CHD7-211ENST00000532149 PPP2R3BQ9Y5P8 575 aa13.84□□□□□ -0.19
CHD7-211ENST00000532149 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 PVALEFA0A1B0GWK0 134 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 H7C1D1 291 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 BIN1O00499 593 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 NDUFB10O96000 172 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 SERPINC1P01008 464 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
CHD7-211ENST00000532149 UBASH3AP57075 661 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 FANCCQ00597 558 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 PSMD2Q13200 908 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
CHD7-211ENST00000532149 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 SIAH1Q8IUQ4 282 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 CDK5RAP3Q96JB5 506 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 MBOAT7Q96N66 472 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 KCND1Q9NSA2 647 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 BIN2Q9UBW5 565 aaPredicted RBP13.83□□□□□ -0.2
CHD7-211ENST00000532149 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 RWDD2AQ9UIY3 292 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 BOLA1Q9Y3E2 137 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.2
CHD7-211ENST00000532149 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 USP17L10C9JJH3 530 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 KIF2AO00139 706 aaPredicted RBP13.82□□□□□ -0.2
CHD7-211ENST00000532149 FZD9O00144 591 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 WNT10BO00744 389 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 AP5Z1O43299 807 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 MARCH6O60337 910 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
CHD7-211ENST00000532149 CYP3A4P08684 503 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 CACNB3P54284 484 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 USP14P54578 494 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 KCTD1Q719H9 257 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 ERMNQ8TAM6 284 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 KIAA1524Q8TCG1 905 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 COA7Q96BR5 231 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
CHD7-211ENST00000532149 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 VCPKMTQ9H867 229 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
CHD7-211ENST00000532149 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
CHD7-211ENST00000532149 TMEM232C9JQI7 657 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 KIF20AO95235 890 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 FGFR1OPO95684 399 aaKnown RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 RPN1P04843 607 aaKnown RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 MUTP22033 750 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms