RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
C11orf54-209ENST00000530620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
C11orf54-209ENST00000530620 ZNF536O15090 1300 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 NMT2O60551 498 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
C11orf54-209ENST00000530620 SLC1A4P43007 532 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 PRSS12P56730 875 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 MYLIPQ8WY64 445 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 SEMA6BQ9H3T3 888 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 ABHD16BQ9H3Z7 469 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 A1CFQ9NQ94 594 aaKnown RBP12.64□□□□□ -0.39
C11orf54-209ENST00000530620 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 TBX21Q9UL17 535 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 STX8Q9UNK0 236 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
C11orf54-209ENST00000530620 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 CTAGE5O15320 804 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 ASGR1P07306 291 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 MCCP23508 829 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 GJA9P57773 515 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
C11orf54-209ENST00000530620 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 IL17RBQ9NRM6 502 aa12.63□□□□□ -0.39
C11orf54-209ENST00000530620 DDX49Q9Y6V7 483 aaKnown RBP12.63□□□□□ -0.39
C11orf54-209ENST00000530620 ASTN1O14525 1302 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 ELP1O95163 1332 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 CDH23Q9H251 3354 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 TANC1Q9C0D5 1861 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-209ENST00000530620 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 FDX1P10109 184 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 PTGS1P23219 599 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 SNAP25P60880 206 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 BEX3Q00994 111 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
C11orf54-209ENST00000530620 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-209ENST00000530620 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 COL25A1Q9BXS0 654 aaPredicted RBP12.62□□□□□ -0.39
C11orf54-209ENST00000530620 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 SCN5AQ14524 2016 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
C11orf54-209ENST00000530620 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
C11orf54-209ENST00000530620 BHMG1C9JSJ3 638 aaPredicted RBP12.61□□□□□ -0.39
C11orf54-209ENST00000530620 TIMP1P01033 207 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 ALAS1P13196 640 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 CDK7P50613 346 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 GNASQ5JWF2 1037 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 FAM126BQ8IXS8 530 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.61□□□□□ -0.397e-6■■□□□ 11.5
C11orf54-209ENST00000530620 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
C11orf54-209ENST00000530620 TMEM265A0A087WTH1 108 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 ARVCFO00192 962 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 PLA2G6O60733 806 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 FOSL2P15408 326 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 DNAJB2P25686 324 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
C11orf54-209ENST00000530620 NKX3-2P78367 333 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 RCSD1Q6JBY9 416 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 CHD9Q3L8U1 2897 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
C11orf54-209ENST00000530620 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 ORC4O43929 436 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
C11orf54-209ENST00000530620 CSF2RAP15509 400 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 NOVP48745 357 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
C11orf54-209ENST00000530620 ANKRD45Q5TZF3 282 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 CXCL17Q6UXB2 119 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
C11orf54-209ENST00000530620 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms