RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MYO1BO43795 1136 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.34
USP35-207ENST00000530546 TECP42680 631 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 PACS2Q86VP3 889 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 CARD6Q9BX69 1037 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 RIOX1Q9H6W3 641 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 SWAP70Q9UH65 585 aa12.96□□□□□ -0.34
USP35-207ENST00000530546 IGKV6D-41A0A0C4DH26 115 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 DDTLA6NHG4 134 aaPredicted RBP12.95□□□□□ -0.34
USP35-207ENST00000530546 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 NOVP48745 357 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 UBE2SQ16763 222 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 RABGGTAQ92696 567 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
USP35-207ENST00000530546 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
USP35-207ENST00000530546 TNNI2P48788 182 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 ADCY7P51828 1080 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
USP35-207ENST00000530546 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
USP35-207ENST00000530546 CCDC151A5D8V7 595 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 USP17L10C9JJH3 530 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
USP35-207ENST00000530546 TXKP42681 527 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
USP35-207ENST00000530546 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
USP35-207ENST00000530546 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 CABP7Q86V35 215 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 MAP2K7O14733 419 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 RSRC2Q7L4I2 434 aaKnown RBP12.94□□□□□ -0.34
USP35-207ENST00000530546 CCDC91Q7Z6B0 441 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 LRRC15Q8TF66 581 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 NELFBQ8WX92 580 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
USP35-207ENST00000530546 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
USP35-207ENST00000530546 EIF3CLB5ME19 914 aaKnown RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 CPP00450 1065 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 PLCG1P19174 1290 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 BRD3Q15059 726 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 EIF3CQ99613 913 aaKnown RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 PLIN4Q96Q06 1357 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 GDF11O95390 407 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 TDP2O95551 362 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 CORO7P57737 925 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 NR1I3Q14994 352 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 STYK1Q6J9G0 422 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP35-207ENST00000530546 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 C21orf2O43822 256 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 PRCPP42785 496 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 PAK1Q13153 545 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
USP35-207ENST00000530546 CNPY4Q8N129 248 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
USP35-207ENST00000530546 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 SNAP25P60880 206 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 PDGFDQ9GZP0 370 aaPredicted RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 VPS16Q9H269 839 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 LAD1O00515 517 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 SLC37A4O43826 429 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 TBX2Q13207 712 aaPredicted RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 SEPT2Q15019 361 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 DRC1Q96MC2 740 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 BAG1Q99933 345 aaPredicted RBP12.92□□□□□ -0.34
USP35-207ENST00000530546 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 CCSER1Q9C0I3 900 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 TAB2Q9NYJ8 693 aa12.92□□□□□ -0.34
USP35-207ENST00000530546 PNMA6FA0A0J9YX94 578 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 H3BQF6 201 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 PPIP5K2O43314 1243 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
USP35-207ENST00000530546 PRPHP41219 470 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 SLC15A2Q16348 729 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms