RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 AK5Q9Y6K8 562 aa5.38□□□□□ -1.55
C11orf54-208ENST00000530279 SPATA31A3Q5VYP0 1347 aa5.38□□□□□ -1.55
C11orf54-208ENST00000530279 POLR3AO14802 1390 aaPredicted RBP5.38□□□□□ -1.55
C11orf54-208ENST00000530279 PNPLA6Q8IY17 1366 aa5.38□□□□□ -1.55
C11orf54-208ENST00000530279 PHLPP1O60346 1717 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 FMN2Q9NZ56 1722 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 WASH4PA8MWX3 477 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 HRKO00198 91 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 CYP7A1P22680 504 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 KCNC1P48547 511 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 KRT28Q7Z3Y7 464 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 FAM129CQ86XR2 697 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 TMEFF1Q8IYR6 380 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 TP53I13Q8NBR0 393 aaPredicted RBP5.37□□□□□ -1.55
C11orf54-208ENST00000530279 ZNF507Q8TCN5 953 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 COX4I2Q96KJ9 171 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 NINLQ9Y2I6 1382 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 PXDNQ92626 1479 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 MED1Q15648 1581 aaPredicted RBP5.37□□□□□ -1.55
C11orf54-208ENST00000530279 SHPRHQ149N8 1683 aa5.37□□□□□ -1.55
C11orf54-208ENST00000530279 C1QTNF3-AMACRE9PGA6 284 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 TPP2P29144 1249 aaPredicted RBP5.36□□□□□ -1.55
C11orf54-208ENST00000530279 ZNF76P36508 570 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 TAGLNQ01995 201 aaKnown RBP5.36□□□□□ -1.55
C11orf54-208ENST00000530279 SAFB2Q14151 953 aaKnown RBP eCLIP5.36□□□□□ -1.55
C11orf54-208ENST00000530279 MFSD2AQ8NA29 543 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 NGDNQ8NEJ9 315 aaKnown RBP5.36□□□□□ -1.55
C11orf54-208ENST00000530279 RIN3Q8TB24 985 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 EMILIN2Q9BXX0 1053 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 CNTD2Q9H8S5 307 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 NPHS2Q9NP85 383 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 SMPD4Q9NXE4 827 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 PRR36Q9H6K5 1346 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 TNS3Q68CZ2 1445 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 ATP7BP35670 1465 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 TRPM1Q7Z4N2 1603 aa5.36□□□□□ -1.55
C11orf54-208ENST00000530279 ARHGEF28Q8N1W1 1705 aaKnown RBP5.35□□□□□ -1.55
C11orf54-208ENST00000530279 CYR61O00622 381 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 C6P13671 934 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 CHRNEQ04844 493 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 EGR3Q06889 387 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 ADGRF1Q5T601 910 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 LETMD1Q6P1Q0 360 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 PIWIL2Q8TC59 973 aaKnown RBP5.35□□□□□ -1.55
C11orf54-208ENST00000530279 SYTL4Q96C24 671 aaPredicted RBP5.35□□□□□ -1.55
C11orf54-208ENST00000530279 SHISA4Q96DD7 197 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 HIRIP3Q9BW71 556 aaPredicted RBP5.35□□□□□ -1.55
C11orf54-208ENST00000530279 TGIF2Q9GZN2 237 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 CCSER2Q9H7U1 834 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 CACNA2D2Q9NY47 1150 aa5.35□□□□□ -1.55
C11orf54-208ENST00000530279 COL22A1Q8NFW1 1626 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-208ENST00000530279 CDK12Q9NYV4 1490 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-208ENST00000530279 ACEP12821 1306 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 TTC21AQ8NDW8 1320 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 GALK1P51570 392 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 NAALADL2Q58DX5 795 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 MEX3CQ5U5Q3 659 aaKnown RBP5.34□□□□□ -1.55
C11orf54-208ENST00000530279 CPZQ66K79 652 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 ZFPM1Q8IX07 1006 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 UBXN4Q92575 508 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 VWCEQ96DN2 955 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 TESK2Q96S53 571 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
C11orf54-208ENST00000530279 RGS17Q9UGC6 210 aaPredicted RBP5.34□□□□□ -1.55
C11orf54-208ENST00000530279 NME2P22392 152 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 VIPR1P32241 457 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 TMF1P82094 1093 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 ZNF252P-AS1Q0IIN9 211 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 ORC1Q13415 861 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 HS2ST1Q7LGA3 356 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 FERMT3Q86UX7 667 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 VPS37DQ86XT2 251 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 NT5DC4Q86YG4 428 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 DDX17Q92841 729 aaKnown RBP5.33□□□□□ -1.56
C11orf54-208ENST00000530279 CCDC74AQ96AQ1 378 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 NECAB3Q96P71 396 aaPredicted RBP5.33□□□□□ -1.56
C11orf54-208ENST00000530279 TRIT1Q9H3H1 467 aaKnown RBP5.33□□□□□ -1.56
C11orf54-208ENST00000530279 C12orf49Q9H741 205 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 CBX8Q9HC52 389 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 TERF2IPQ9NYB0 399 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 DUSP13Q9UII6 198 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 TRPC5Q9UL62 973 aaPredicted RBP5.33□□□□□ -1.56
C11orf54-208ENST00000530279 WWC3Q9ULE0 1092 aa5.33□□□□□ -1.56
C11orf54-208ENST00000530279 CPSF1Q10570 1443 aaKnown RBP5.32□□□□□ -1.56
C11orf54-208ENST00000530279 PPIP5K1Q6PFW1 1433 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 SSH2Q76I76 1423 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 CPDO75976 1380 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 USP47Q96K76 1375 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 ITSN1Q15811 1721 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 USP19O94966 1318 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 AFF2P51816 1311 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 ST20-MTHFSA0A0A6YYL1 179 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 IGSF3O75054 1194 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
C11orf54-208ENST00000530279 TACR2P21452 398 aa5.32□□□□□ -1.56
C11orf54-208ENST00000530279 ST13P50502 369 aaKnown RBP5.32□□□□□ -1.56
C11orf54-208ENST00000530279 RBM6P78332 1123 aaKnown RBP5.32□□□□□ -1.56
C11orf54-208ENST00000530279 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms