RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 ALG1Q9BT22 464 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 PPP1R9AQ9ULJ8 1098 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 PTPRFP10586 1907 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 SLC10A3P09131 477 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 FDPSP14324 419 aaKnown RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 OSBPP22059 807 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 GJA5P36382 358 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 GSDMDP57764 484 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 ZNF397Q8NF99 534 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 ZCCHC17Q9NP64 241 aaKnown RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 SLC16A2P36021 539 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 IRX3P78415 501 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 DHX8Q14562 1220 aaKnown RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 CDC37Q16543 378 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 CEP57L1Q8IYX8 460 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 MB21D1Q8N884 522 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 PIGSQ96S52 555 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
NR1H3-231ENST00000529540 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 IMPACTQ9P2X3 320 aa16.55■□□□□ 0.24
NR1H3-231ENST00000529540 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 ZBED4O75132 1171 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 OAZ1P54368 228 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 CCL15Q16663 113 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 ANKRD23Q86SG2 305 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 ERO1AQ96HE7 468 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 BRMS1Q9HCU9 246 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
NR1H3-231ENST00000529540 A0A1W2PQ27 194 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 A0A1W2PQ64 194 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 A0A1W2PQD8 194 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 TESPA1A2RU30 521 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-231ENST00000529540 BECN2A8MW95 431 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 SKILP12757 684 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 CALML3P27482 149 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 DSG3P32926 999 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 KCNJ6P48051 423 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.24
NR1H3-231ENST00000529540 PKN1Q16512 942 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
NR1H3-231ENST00000529540 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 USP28Q96RU2 1077 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 NAT10Q9H0A0 1025 aaKnown RBP16.53■□□□□ 0.24
NR1H3-231ENST00000529540 RASSF10A6NK89 507 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 FBXO11Q86XK2 927 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 CPVLQ9H3G5 476 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 SLC38A10Q9HBR0 1119 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 ADAMTS5Q9UNA0 930 aa16.53■□□□□ 0.24
NR1H3-231ENST00000529540 GNA11P29992 359 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 NOGQ13253 232 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 DGKZQ13574 1117 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 MOGSQ13724 837 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 SLC35G1Q2M3R5 365 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 TREML2Q5T2D2 321 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.23
NR1H3-231ENST00000529540 FSIP1Q8NA03 581 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.23
NR1H3-231ENST00000529540 MYH6P13533 1939 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 VWA5AO00534 786 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 TUBB4AP04350 444 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 ICAM1P05362 532 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 ARID5BQ14865 1188 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 DEFB115Q30KQ5 88 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
NR1H3-231ENST00000529540 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
NR1H3-231ENST00000529540 MAF1Q9H063 256 aa16.51■□□□□ 0.23
NR1H3-231ENST00000529540 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 COPB2P35606 906 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 NAPAP54920 295 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 TAF3Q5VWG9 929 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 WWC2Q6AWC2 1192 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms